RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 UGT8Q16880 541 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 VMACQ2NL98 169 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 DPY19L3Q6ZPD9 716 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 HTR3DQ70Z44 454 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 TCEAL8Q8IYN2 117 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 CLECL1Q8IZS7 167 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 PARP8Q8N3A8 854 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 MCCC1Q96RQ3 725 aaPredicted RBP11.45□□□□□ -0.58
CD44-209ENST00000433892 RHNO1Q9BSD3 238 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 BRD9Q9H8M2 597 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 B4GALT6Q9UBX8 382 aa11.45□□□□□ -0.58
CD44-209ENST00000433892 MAGEB17A8MXT2 336 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 GFYI3L273 518 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 TOR1BO14657 336 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 YY2O15391 372 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 UGT2B11O75310 529 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SH3BGRLO75368 114 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 FABP3P05413 133 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 COX7A2P14406 83 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CD22P20273 847 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CYP2A7P20853 494 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 KDELR2P33947 212 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 IDUAP35475 653 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 WNT3P56703 355 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PFN3P60673 137 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 LSM3P62310 102 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 IRF8Q02556 426 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 MTAPQ13126 283 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 NPTX1Q15818 432 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SMN1Q16637 294 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 KDM4DQ6B0I6 523 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 C22orf39Q6P5X5 142 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 BTLAQ7Z6A9 289 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 IGFN1Q86VF2 1251 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ZZZ3Q8IYH5 903 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CSGALNACT1Q8TDX6 532 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 MRPS31Q92665 395 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 RORBQ92753 470 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SCAMP4Q969E2 229 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ZNF566Q969W8 418 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ZNF641Q96N77 438 aaPredicted RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 TM9SF3Q9HD45 589 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PCDH12Q9NPG4 1184 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PDP1Q9P0J1 537 aaPredicted RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 SLCO3A1Q9UIG8 710 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ZNF510Q9Y2H8 683 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PLXNB3Q9ULL4 1909 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 A0A1W2PQ67 120 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 M0QX08 132 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 EIF3FO00303 357 aaPredicted RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 SCN2BO60939 215 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SULT1C4O75897 302 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 EPN2O95208 641 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 FUCA1P04066 466 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 URODP06132 367 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 JUPP14923 745 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 HOXB6P17509 224 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 ALDH4A1P30038 563 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CD6P30203 668 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 DNAJA1P31689 397 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 TRPC1P48995 793 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CCR3P51677 355 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 DGCR6Q14129 220 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 XKR6Q5GH73 641 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 MPP7Q5T2T1 576 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CCDC81Q6ZN84 652 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 HORMAD1Q86X24 394 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PTOV1Q86YD1 416 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 HOMEZQ8IX15 550 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 TMCO5AQ8N6Q1 288 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CHST14Q8NCH0 376 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SETD9Q8NE22 299 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CHPT1Q8WUD6 406 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 MYLIPQ8WY64 445 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ELMO1Q92556 727 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 POP5Q969H6 163 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 UBE2FQ969M7 185 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 GABARAPL1Q9H0R8 117 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PALMDQ9NP74 551 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 CHCHD3Q9NX63 227 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 VPS4AQ9UN37 437 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 ERGIC3Q9Y282 383 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 PPIL1Q9Y3C6 166 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
CD44-209ENST00000433892 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 GMPPBQ9Y5P6 360 aa11.44□□□□□ -0.58
CD44-209ENST00000433892 TEX28O15482 410 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 DNAJB5O75953 348 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 LAMP1P11279 417 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 CA8P35219 290 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 SLC35A2P78381 396 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 GSTM4Q03013 218 aa11.43□□□□□ -0.58
CD44-209ENST00000433892 SRSF11Q05519 484 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms