RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CFAP61Q8NHU2 1237 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 SNRNP27Q8WVK2 155 aaKnown RBP2.8□□□□□ -1.96
CLK1-204ENST00000432425 PIGBQ92521 554 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 RASL10AQ92737 203 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 PRICKLE1Q96MT3 831 aaPredicted RBP2.8□□□□□ -1.96
CLK1-204ENST00000432425 SOSTQ9BQB4 213 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 TRIM6Q9C030 488 aaPredicted RBP2.8□□□□□ -1.96
CLK1-204ENST00000432425 GOLPH3LQ9H4A5 285 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 NSMCE4AQ9NXX6 385 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 R4GN57 208 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 ARID2Q68CP9 1835 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 IGKV6D-41A0A0C4DH26 115 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 H0YAE9 185 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 BEST1O76090 585 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 GFPT2O94808 682 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 RPN1P04843 607 aaKnown RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 RAB40ALP0C0E4 278 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 IRF2P14316 349 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CAPN2P17655 700 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MPZP25189 248 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 RBMS1P29558 406 aaKnown RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 TDO2P48775 406 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 LIG4P49917 911 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ALDH3A2P51648 485 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MYL7Q01449 175 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 NUCB1Q02818 461 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MCMDC2Q4G0Z9 681 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 PRR27Q6MZM9 219 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 NDUFAF2Q8N183 169 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 SYT2Q8N9I0 419 aaPredicted RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 C4orf45Q96LM5 186 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 FOXN4Q96NZ1 517 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 SPAG5Q96R06 1193 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MYCBPQ99417 103 aaPredicted RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 LPAR4Q99677 370 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 RAB11FIP5Q9BXF6 653 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 PRRG4Q9BZD6 226 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CCDC68Q9H2F9 335 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 TLE6Q9H808 572 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MYNNQ9NPC7 610 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 NDE1Q9NXR1 346 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 IL17BQ9UHF5 180 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CPSF3Q9UKF6 684 aaKnown RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 SNX8Q9Y5X2 465 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CROCCQ5TZA2 2017 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 BICDL2A1A5D9 508 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ASB14A6NK59 587 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 EPM2AB3EWF7 344 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 O00370 1275 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 FPGTO14772 594 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ABCB1P08183 1280 aaPredicted RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 RPL35AP18077 110 aaKnown RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 PTGER3P43115 390 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 XGP55808 180 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 HNRNPKP61978 463 aaKnown RBP eCLIP2.79□□□□□ -1.96
CLK1-204ENST00000432425 CSNK2BP67870 215 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 SLC10A5Q5PT55 438 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CES4AQ5XG92 561 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 FRRS1Q6ZNA5 592 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ADGRA1Q86SQ6 560 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 Q8N377 158 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 AQP11Q8NBQ7 271 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 OR4K1Q8NGD4 311 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MIPOL1Q8TD10 442 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MOB3AQ96BX8 217 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ZNF830Q96NB3 372 aaPredicted RBP2.79□□□□□ -1.96
CLK1-204ENST00000432425 AGAP4Q96P64 663 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 GAL3ST4Q96RP7 486 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 MXD3Q9BW11 206 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 CCDC106Q9BWC9 280 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ZMYND12Q9H0C1 365 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 ANKZF1Q9H8Y5 726 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 B3GAT2Q9NPZ5 323 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 SH3GLB2Q9NR46 395 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 HAO2Q9NYQ3 351 aa2.79□□□□□ -1.96
CLK1-204ENST00000432425 HCFC1P51610 2035 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 SNURFLB1AK76 121 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 TEX28O15482 410 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 SRSF10O75494 262 aaKnown RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 ERAL1O75616 437 aaKnown RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 PTGER4P35408 488 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 ACTN2P35609 894 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 RAD52P43351 418 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 PGFP49763 221 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 DNA2P51530 1060 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 PAX8Q06710 450 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 CUL3Q13618 768 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 CDH18Q13634 790 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 ITGA7Q13683 1181 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 VEZF1Q14119 521 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 CCDC92Q53HC0 331 aaPredicted RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 C6orf163Q5TEZ5 329 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 FAM198BQ6UWH4 519 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 LEKR1Q6ZMV7 388 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 CHMP1BQ7LBR1 199 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 CATSPERDQ86XM0 798 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 EGFL6Q8IUX8 553 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 HSCBQ8IWL3 235 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 METTL4Q8N3J2 472 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 ATP8B4Q8TF62 1192 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms