RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZFYVE21Q9BQ24 234 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 RAB11FIP5Q9BXF6 653 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 TSGA10Q9BZW7 698 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 SLC26A1Q9H2B4 701 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF282Q9UDV7 671 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 SOX13Q9UN79 622 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 MRPS2Q9Y399 296 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 CNTRLQ7Z7A1 2325 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 ITPR2Q14571 2701 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 SCN2AQ99250 2005 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 A0A0A6YYC8 382 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 E5RI56 91 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 I3L1I5 382 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 E2F3O00716 465 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 MAP2K7O14733 419 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 SRPX2O60687 465 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 MATN4O95460 622 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 DDAH2O95865 285 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 UQCRHP07919 91 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 ACPPP15309 386 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 CDC25BP30305 580 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 MRNIPQ6NTE8 343 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 TTC27Q6P3X3 843 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 CSNK1A1LQ8N752 337 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 PRELID2Q8N945 189 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 OR1N1Q8NGS0 311 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 PPP4R1Q8TF05 950 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 PEX13Q92968 403 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF669Q96BR6 464 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 EPS8L2Q9H6S3 715 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 AGPAT4Q9NRZ5 378 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 PCYOX1Q9UHG3 505 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 CSMD1Q96PZ7 3565 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 NOTCH2Q04721 2471 aa13.57□□□□□ -0.24
SMARCE1-205ENST00000431889 IGHV3-20A0A0C4DH32 117 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 OR2A25A4D2G3 310 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 CTAGE9A4FU28 777 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 WIPF3A6NGB9 483 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 HAT1O14929 419 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 JRKO75564 520 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 ONECUT2O95948 504 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 VARSP26640 1264 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 KCNK10P57789 538 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 ARG2P78540 354 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 GBX1Q14549 363 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 TYSND1Q2T9J0 566 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF470Q6ECI4 717 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF549Q6P9A3 640 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 PRSS41Q7RTY9 318 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 CAND1Q86VP6 1230 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 FJX1Q86VR8 437 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 PAQR7Q86WK9 346 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 LRRC6Q86X45 466 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 REXO1L1PQ8IX06 675 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 PLCD4Q9BRC7 762 aa13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 MRM3Q9HC36 420 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-205ENST00000431889 DIDO1Q9BTC0 2240 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 NSG1A0A0A6YYJ2 146 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 IDSB3KWA1 339 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 KPNA5O15131 536 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ZG16O60844 167 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 SLC16A8O95907 504 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 HPP00738 406 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 COX6A1P12074 109 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 PKMP14618 531 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 CCNFP41002 786 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 CLCN7P51798 805 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 PNLIPRP1P54315 467 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 EMP2P54851 167 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 MUM1Q2TAK8 710 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 PRTGQ2VWP7 1150 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 YOD1Q5VVQ6 348 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 NEPROQ6NW34 567 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ISLR2Q6UXK2 745 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 CILP2Q8IUL8 1156 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 AGGF1Q8N302 714 aaeCLIP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 AMER3Q8N944 861 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ST6GALNAC3Q8NDV1 305 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 HMGCLL1Q8TB92 370 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 ALKBH8Q96BT7 664 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 SPATA7Q9P0W8 599 aa13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-205ENST00000431889 H7BY64 318 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 FOXS1O43638 330 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 PSIP1O75475 530 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 WISP2O76076 250 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 USP1O94782 785 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 KRT14P02533 472 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 HEXBP07686 556 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 PRR35P0CG20 571 aa13.54□□□□□ -0.24
SMARCE1-205ENST00000431889 TPSB2P20231 275 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms