RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 DNM1LO00429 736 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 SLC30A4O14863 429 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 AP5Z1O43299 807 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ARHGEF9O43307 516 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 CELF2O95319 508 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 HSPA4LO95757 839 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 YES1P07947 543 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZNF883P0CG24 379 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ACP2P11117 423 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 CD22P20273 847 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ALDH4A1P30038 563 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 HLA-FP30511 346 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 SFTPDP35247 375 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 WNT5AP41221 380 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 TSFMP43897 325 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 IER3P46695 156 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 CDX1P47902 265 aaPredicted RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 RGS7P49802 495 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 GUCY2DQ02846 1103 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 IL10RBQ08334 325 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 CAMK2DQ13557 499 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 VEZF1Q14119 521 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 TRIM29Q14134 588 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 OPCMLQ14982 345 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MTHFSDQ2M296 383 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 KLHL26Q53HC5 615 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZNF789Q5FWF6 425 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 DCAF10Q5QP82 559 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.92□□□□□ -2.1
CDC40-204ENST00000431461 HECTD3Q5T447 861 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 FAM91A1Q658Y4 838 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 FUT10Q6P4F1 479 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 IL27RAQ6UWB1 636 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 PPP1R21Q6ZMI0 780 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MARK2Q7KZI7 788 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 FCRLAQ7L513 359 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ANKRD23Q86SG2 305 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 KRTAP7-1Q8IUC3 87 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 TMEM139Q8IV31 216 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 KIRREL3Q8IZU9 778 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZNF444Q8N0Y2 327 aaPredicted RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 MAPKAPK5-AS1Q8N8E1 139 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZNF383Q8NA42 475 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 GPRC5AQ8NFJ5 357 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 TRIM58Q8NG06 486 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 OR4D10Q8NGI6 311 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 PSMA8Q8TAA3 256 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MAPK15Q8TD08 544 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 KCNE4Q8WWG9 221 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 METTL21AQ8WXB1 218 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ARHGAP45Q92619 1136 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 SECISBP2LQ93073 1101 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZNF524Q96C55 264 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ALG14Q96F25 216 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 C4orf45Q96LM5 186 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 FER1L6-AS2Q96M78 137 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ZMAT2Q96NC0 199 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 CDCA3Q99618 268 aaPredicted RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 LPAR4Q99677 370 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MAP3K3Q99759 626 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 PSD2Q9BQI7 771 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 FUCA2Q9BTY2 467 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 NYXQ9GZU5 481 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 Q9H8V8 135 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MTHFD2LQ9H903 347 aaPredicted RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 RNF121Q9H920 327 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 MYNNQ9NPC7 610 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 SLC52A3Q9NQ40 469 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 P4HTMQ9NXG6 502 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 GIMAP2Q9UG22 337 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 DAPK2Q9UIK4 370 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 GTF3C4Q9UKN8 822 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 ELF5Q9UKW6 265 aaPredicted RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 CDH7Q9ULB5 785 aa1.92□□□□□ -2.1
CDC40-204ENST00000431461 PA2G4Q9UQ80 394 aaKnown RBP1.92□□□□□ -2.1
CDC40-204ENST00000431461 RNF123Q5XPI4 1314 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 NPHP3Q7Z494 1330 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SMCHD1A6NHR9 2005 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TRAV34A0A0B4J273 112 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 IGKV6D-41A0A0C4DH26 115 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 A0A1W2PPM1 405 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 FEZF1A0PJY2 475 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 MEIOCA2RUB1 952 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CASTOR2A6NHX0 329 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 KPNA7A9QM74 516 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 NPIPA3F8WFD2 350 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TEX28O15482 410 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 EXTL3O43909 919 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 ZNF500O60304 480 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 KHDRBS3O75525 346 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 CDC123O75794 336 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 NXPH2O95156 264 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PENKP01210 267 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 OR52Z1P0C646 297 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SLC2A2P11168 524 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 PDGFRAP16234 1089 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 ADRA2CP18825 462 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TYMPP19971 482 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CTNNA1P35221 906 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms