RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CPNE7Q9UBL6 633 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 ZFP69BQ9UJL9 534 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 SNX6Q9UNH7 406 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 BTRCQ9Y297 605 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 PCDHGA5Q9Y5G8 931 aa17.6■□□□□ 0.41
HMGN1-206ENST00000431390 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 A0A1W2PPV9 198 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 ERICH4A6NGS2 130 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 FCHO1O14526 889 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 AQP9O43315 295 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 KCNK5O95279 499 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 ZNF33BQ06732 778 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 DOC2AQ14183 400 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 CPSF6Q16630 551 aaKnown RBP eCLIP17.59■□□□□ 0.41
HMGN1-206ENST00000431390 FAM219BQ5XKK7 198 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 FAM91A1Q658Y4 838 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 IL27RAQ6UWB1 636 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 LARP4Q71RC2 724 aaKnown RBP eCLIP17.59■□□□□ 0.412e-12■■■■■ 31.7
HMGN1-206ENST00000431390 SLC9B2Q86UD5 537 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 SYT12Q8IV01 421 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 LMNTD1Q8N9Z9 388 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 ZNF548Q8NEK5 533 aaPredicted RBP17.59■□□□□ 0.41
HMGN1-206ENST00000431390 SLC37A2Q8TED4 501 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 SH3KBP1Q96B97 665 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 ERP27Q96DN0 273 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 C3orf30Q96M34 536 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 EFCAB11Q9BUY7 163 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 NMUR2Q9GZQ4 415 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 XKR8Q9H6D3 395 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 TMEM74BQ9NUR3 256 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 RIC8BQ9NVN3 520 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 DOLKQ9UPQ8 538 aa17.59■□□□□ 0.41
HMGN1-206ENST00000431390 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 E9PBE3 544 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 LMO7DNF2Z398 122 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 MANBAO00462 879 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 KLHL41O60662 606 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 ULK1O75385 1050 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 PIAS2O75928 621 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 LINC00032P0C843 101 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 C1GALT1C1LP0DN25 315 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 HTR6P50406 440 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 ZRSR2Q15696 482 aaKnown RBP17.58■□□□□ 0.41
HMGN1-206ENST00000431390 KIF19Q2TAC6 998 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 TCHHL1Q5QJ38 904 aaPredicted RBP17.58■□□□□ 0.41
HMGN1-206ENST00000431390 NXNQ6DKJ4 435 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 NXPE4Q6UWF7 544 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 RABEPKQ7Z6M1 372 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 CLNKQ7Z7G1 428 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 TMPRSS11BQ86T26 416 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 AMIGO1Q86WK6 493 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 C17orf64Q86WR6 236 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 C2orf73Q8N5S3 287 aaPredicted RBP17.58■□□□□ 0.41
HMGN1-206ENST00000431390 LCN9Q8WX39 176 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 PATE1Q8WXA2 126 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 NRTNQ99748 197 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 TAC3Q9UHF0 121 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 PCDHB11Q9Y5F2 797 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 SNX11Q9Y5W9 270 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 PTGDR2Q9Y5Y4 395 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 TMEM131Q92545 1883 aa17.58■□□□□ 0.41
HMGN1-206ENST00000431390 LAMA1P25391 3075 aa17.58■□□□□ 0.4
HMGN1-206ENST00000431390 SERTM1A2A2V5 107 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 FAM221BA6H8Z2 402 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 H0YIV9 168 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 FFAR3O14843 346 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 YY2O15391 372 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 GPR42O15529 346 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PRICKLE3O43900 615 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PRR35P0CG20 571 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 CD22P20273 847 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 RXRGP48443 463 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 LAPTM5Q13571 262 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ABRAXAS2Q15018 415 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PAGE2BQ5JRK9 111 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 TRIM46Q7Z4K8 759 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 YTHDF3Q7Z739 585 aaKnown RBP17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PIGKQ92643 395 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 TWSG1Q9GZX9 223 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ELOVL6Q9H5J4 265 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 AKTIPQ9H8T0 292 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PELI2Q9HAT8 420 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 SAR1AQ9NR31 198 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 MRGBPQ9NV56 204 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ZNF490Q9ULM2 529 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-206ENST00000431390 SH2B3Q9UQQ2 575 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 PCDHGA11Q9Y5H2 935 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 CSNK1G3Q9Y6M4 447 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ATP6AP2A0A1C7CYW4 349 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 SLC28A1O00337 649 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ATP6AP2O75787 350 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 ANXA6P08133 673 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 BNC1Q01954 994 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 GPR18Q14330 331 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 CATSPEREQ5SY80 951 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 C10orf62Q5T681 223 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-206ENST00000431390 FRG2Q64ET8 278 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 CHSY3Q70JA7 882 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 TUBGCP3Q96CW5 907 aa17.57■□□□□ 0.4
HMGN1-206ENST00000431390 FRG2BQ96QU4 278 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms