RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 PON2Q15165 354 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 STILQ15468 1287 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 MAPK11Q15759 364 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 SLC18A3Q16572 532 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 USH1GQ495M9 461 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 TMIGD1Q6UXZ0 262 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 USP30Q70CQ3 517 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 UTS2BQ765I0 119 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 RIT1Q92963 219 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 MED30Q96HR3 178 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 LRRC37BQ96QE4 947 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 H2AFJQ9BTM1 129 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 FTHL17Q9BXU8 183 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 SLCO5A1Q9H2Y9 848 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 RANBP3Q9H6Z4 567 aaPredicted RBP3.4□□□□□ -1.86
CCDC30-203ENST00000428554 ASB8Q9H765 288 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 ROPN1Q9HAT0 212 aaPredicted RBP3.4□□□□□ -1.86
CCDC30-203ENST00000428554 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.86
CCDC30-203ENST00000428554 PIGVQ9NUD9 493 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 ONECUT1Q9UBC0 465 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 RBPJLQ9UBG7 517 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 CYTH4Q9UIA0 394 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 CA5BQ9Y2D0 317 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.86
CCDC30-203ENST00000428554 IFT52Q9Y366 437 aa3.4□□□□□ -1.86
CCDC30-203ENST00000428554 UBE2J1Q9Y385 318 aaPredicted RBP3.4□□□□□ -1.86
CCDC30-203ENST00000428554 NEURL4Q96JN8 1562 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 AGAP5A6NIR3 686 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RPP14O95059 124 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 HMBSP08397 361 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MCF2P10911 925 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PFKFB1P16118 471 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ZNF18P17022 549 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CTRB1P17538 263 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MX1P20591 662 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RBL1P28749 1068 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 DCTDP32321 178 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MMP13P45452 471 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RPS5P46782 204 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 KCNJ4P48050 445 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ARSFP54793 590 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 GALCP54803 685 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PRR5P85299 388 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RNPS1Q15287 305 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CRB2Q5IJ48 1285 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 EPHA10Q5JZY3 1008 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PHF19Q5T6S3 580 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CTRB2Q6GPI1 263 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TMEM220Q6QAJ8 160 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RPTNQ6XPR3 784 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 KCTD8Q6ZWB6 473 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 FRMD5Q7Z6J6 570 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 SCD5Q86SK9 330 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 C17orf78Q8N4C9 275 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 BEND2Q8NDZ0 799 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ABHD4Q8TB40 342 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TCP11Q8WWU5 503 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RAD51AP1Q96B01 352 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ULK4Q96C45 1275 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PABPC5Q96DU9 382 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CCDC120Q96HB5 630 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PLEKHA8Q96JA3 519 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 C4orf36Q96KX1 117 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ZNF48Q96MX3 618 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MTERF1Q99551 399 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 NAPBQ9H115 298 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 KCNK15Q9H427 330 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 SMYD3Q9H7B4 428 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CSNK1G1Q9HCP0 422 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RANGRFQ9HD47 186 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TREX1Q9NSU2 369 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PEMTQ9UBM1 199 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 DNAJB4Q9UDY4 337 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 DBR1Q9UK59 544 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MAGI1Q96QZ7 1491 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 KDM5BQ9UGL1 1544 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CD8B2A6NJW9 211 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 C17orf100A8MU93 164 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 H3BMM5 538 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TRIM77I1YAP6 450 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 M0QYT0 321 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 MT-ND1P03886 318 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ICAM1P05362 532 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 UGT2B4P06133 528 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 SERPINA6P08185 405 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PNMA6AP0CW24 399 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PTGS1P23219 599 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ELAVL4P26378 380 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 CSNK1EP49674 416 aaKnown RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ERVFRD-1P60508 538 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 PRPS1P60891 318 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 ECT2LQ008S8 904 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 TIAL1Q01085 375 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 LRRC63Q05C16 580 aa3.4□□□□□ -1.87
CCDC30-203ENST00000428554 DMP1Q13316 513 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-203ENST00000428554 RUNX2Q13950 521 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms