RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C1QAP02745 245 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 RAB40ALP0C0E4 278 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 GMPRP36959 345 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 HSD17B2P37059 387 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 GCGRP47871 477 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 ARF3P61204 181 aaPredicted RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 TBPL1P62380 186 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 CAV1Q03135 178 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 PRDX1Q06830 199 aaKnown RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 NFATC3Q12968 1075 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 NAE1Q13564 534 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.13
RTN4-210ENST00000427710 NCF4Q15080 339 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 ZXDCQ2QGD7 858 aaPredicted RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 CPZQ66K79 652 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 AGTRAPQ6RW13 159 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 RNF44Q7L0R7 432 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 SYVN1Q86TM6 617 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 CTAGE3PQ8IX95 158 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 ANKRD49Q8WVL7 239 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 CCDC138Q96M89 665 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 NLNQ9BYT8 704 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 RHOJQ9H4E5 214 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 LRRC4CQ9HCJ2 640 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 SLC22A11Q9NSA0 550 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 CUTCQ9NTM9 273 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 UTP6Q9NYH9 597 aaKnown RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 DMGDHQ9UI17 866 aaKnown RBP14.23□□□□□ -0.13
RTN4-210ENST00000427710 TCFL5Q9UL49 500 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 MAN2B2Q9Y2E5 1009 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 KLK4Q9Y5K2 254 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 KCNMB2Q9Y691 235 aa14.23□□□□□ -0.13
RTN4-210ENST00000427710 FAM159BA6NKW6 160 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 H7BY64 318 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 SLC16A5O15375 505 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 DNAJB5O75953 348 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 CCNDBP1O95273 360 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 NR1D1P20393 614 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 OR1D4P47884 311 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 DCDP81605 110 aaKnown RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 C19orf57Q0VDD7 668 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 KCNAB2Q13303 367 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 SP140Q13342 867 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 UGT8Q16880 541 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 NKAIN1Q4KMZ8 207 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 CRTC2Q53ET0 693 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 COLEC12Q5KU26 742 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 PRAMEF13Q5VWM6 474 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 ZNF425Q6IV72 752 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 LRRC8EQ6NSJ5 796 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 SPATA6LQ8N4H0 392 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 MMGT1Q8N4V1 131 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 PPM1NQ8N819 430 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 TTC29Q8NA56 475 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 FBF1Q8TES7 1133 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 APOBEC4Q8WW27 367 aaKnown RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 PYCR2Q96C36 320 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 MRRFQ96E11 262 aaKnown RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 ZNF285Q96NJ3 590 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 ZFYVE21Q9BQ24 234 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 MCMBPQ9BTE3 642 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 TRIM55Q9BYV6 548 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 CCDC177Q9NQR7 707 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 ZNF71Q9NQZ8 489 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 ZDHHC18Q9NUE0 388 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 GPN3Q9UHW5 284 aaPredicted RBP14.22□□□□□ -0.13
RTN4-210ENST00000427710 SRPK3Q9UPE1 567 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 MAU2Q9Y6X3 613 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 NBASA2RRP1 2371 aa14.22□□□□□ -0.13
RTN4-210ENST00000427710 HYKKA2RU49 373 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 ARGFXA6NJG6 315 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 DSCR3O14972 297 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 P2RX6O15547 441 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 PHGDHO43175 533 aaKnown RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 HIST1H2AGP0C0S8 130 aaPredicted RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 ZNF37AP17032 561 aaPredicted RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 HIST1H2ADP20671 130 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 OTX2P32243 289 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 GRM7Q14831 915 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 HKDC1Q2TB90 917 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 KBTBD12Q3ZCT8 623 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 TCTE1Q5JU00 501 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 COX15Q7KZN9 410 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 PTRH1Q86Y79 214 aaKnown RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 PROKR1Q8TCW9 393 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 CDKL2Q92772 493 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 HIST1H2AHQ96KK5 128 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 HIST1H2AJQ99878 128 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 H2AFJQ9BTM1 129 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 GEMIN8Q9NWZ8 242 aaKnown RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 ARL15Q9NXU5 204 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
RTN4-210ENST00000427710 PTRH2Q9Y3E5 179 aaKnown RBP14.21□□□□□ -0.13
RTN4-210ENST00000427710 A0A1B0GX78 115 aa14.2□□□□□ -0.14
RTN4-210ENST00000427710 CTAGE15A4D2H0 777 aa14.2□□□□□ -0.14
RTN4-210ENST00000427710 FITM1A5D6W6 292 aa14.2□□□□□ -0.14
RTN4-210ENST00000427710 PYCARD-AS1I3L0S3 204 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms