RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NFATC2Q13469 925 aa13□□□□□ -0.33
USP42-203ENST00000426246 AQP6Q13520 282 aa13□□□□□ -0.33
USP42-203ENST00000426246 TTLL9Q3SXZ7 439 aa13□□□□□ -0.33
USP42-203ENST00000426246 RETSATQ6NUM9 610 aa13□□□□□ -0.33
USP42-203ENST00000426246 TMEM126BQ8IUX1 230 aa13□□□□□ -0.33
USP42-203ENST00000426246 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
USP42-203ENST00000426246 VNN3Q9NY84 501 aa13□□□□□ -0.33
USP42-203ENST00000426246 SPEGQ15772 3267 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 ABCB7O75027 752 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CLPXO76031 633 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 EPN2O95208 641 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 TGFB1P01137 390 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CD36P16671 472 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 IDUAP35475 653 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 ST13P50502 369 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 PCBP2Q15366 365 aaKnown RBP eCLIP12.99□□□□□ -0.331e-8■■□□□ 14.3
USP42-203ENST00000426246 ZNF829Q3KNS6 432 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 SBSNQ6UWP8 590 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 Q6ZVL8 140 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 TMPRSS11BQ86T26 416 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 STX19Q8N4C7 294 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CHDHQ8NE62 594 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 KCNJ9Q92806 393 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 TRMT2BQ96GJ1 504 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 FNIP2Q9P278 1114 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 DHRS7Q9Y394 339 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 NPIPB15A6NHN6 443 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 PSMD11O00231 422 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 KPNA3O00505 521 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 KDELR3O43731 214 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 MATN4O95460 622 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CRHBPP24387 322 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 PRKAG1P54619 331 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CARD16Q5EG05 197 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 KLHL17Q6TDP4 642 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 SLC22A16Q86VW1 577 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 GPR26Q8NDV2 337 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 MCFD2Q8NI22 146 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 ZNF382Q96SR6 550 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 RBM4BQ9BQ04 359 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 RBM4Q9BWF3 364 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 ZIM2Q9NZV7 527 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 C5AR2Q9P296 337 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 ABCD2Q9UBJ2 740 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CNOT11Q9UKZ1 510 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 TAPBPO15533 448 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 SOX14O95416 240 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 TRBC1P01850 177 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CD70P32970 193 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 PPM1FP49593 454 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 TAB1Q15750 504 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 DCDC5Q6ZRR9 648 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 BBS7Q8IWZ6 715 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CLP1Q92989 425 aaKnown RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 MGME1Q9BQP7 344 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 ACPTQ9BZG2 426 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 ZBP1Q9H171 429 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 RMND5AQ9H871 391 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 IL17CQ9P0M4 197 aa12.99□□□□□ -0.33
USP42-203ENST00000426246 CXXC1Q9P0U4 656 aaPredicted RBP12.99□□□□□ -0.33
USP42-203ENST00000426246 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 PRSS23O95084 383 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 EPORP19235 508 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 GGT1P19440 569 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 HTR1EP28566 365 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 SERPINB1P30740 379 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 EMX1Q04741 257 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 TRMT11Q7Z4G4 463 aaKnown RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 P2RY8Q86VZ1 359 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 MFSD2AQ8NA29 543 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TRIM39Q9HCM9 518 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 CD320Q9NPF0 282 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 NUDT4Q9NZJ9 180 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 POU2F3Q9UKI9 436 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TCRBV5S2A0A599 114 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 FAM227AF5H4B4 570 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 H3BN98 237 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 PLK4O00444 970 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TEX28O15482 410 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 ALPPL2P10696 532 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 CHI3L1P36222 383 aaPredicted RBP12.98□□□□□ -0.33
USP42-203ENST00000426246 BDKRB1P46663 353 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TRAF3Q13114 568 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP42-203ENST00000426246 GATAD2AQ86YP4 633 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TCEAL8Q8IYN2 117 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 FATE1Q969F0 183 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 TMEM203Q969S6 136 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 CD244Q9BZW8 370 aa12.98□□□□□ -0.33
USP42-203ENST00000426246 BRD9Q9H8M2 597 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms