RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 THAP4Q8WY91 577 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 ZFYVE21Q9BQ24 234 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 CUTCQ9NTM9 273 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 ZDHHC18Q9NUE0 388 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 TXLNGQ9NUQ3 528 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
IGHV3-47-201ENST00000425060 A0A1B0GX78 115 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 ESYT3A0FGR9 886 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 C9J4A7 227 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 DSCR3O14972 297 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 WISP3O95389 354 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 MED26O95402 600 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 MAGEA4P43358 317 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 NKAIN1Q4KMZ8 207 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 C8orf74Q6P047 294 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 AGTRAPQ6RW13 159 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 APLFQ8IW19 511 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 CEP97Q8IW35 865 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 ANKRD7Q92527 254 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 VPS39Q96JC1 886 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 OR2A5Q96R48 311 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 C17orf62Q9BQA9 187 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 SGPP1Q9BX95 441 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 CUEDC1Q9NWM3 386 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 TLN1Q9Y490 2541 aaKnown RBP17.12■□□□□ 0.33
IGHV3-47-201ENST00000425060 B8ZZF3 427 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 H0YGG7 62 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ALAS2P22557 587 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 PMS2P54278 862 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 TBPL1P62380 186 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ILF2Q12905 390 aaKnown RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ZNF460Q14592 562 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 PRTGQ2VWP7 1150 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 FAM214AQ32MH5 1076 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 MLIPQ5VWP3 458 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 SBSNQ6UWP8 590 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 TMEM151BQ8IW70 566 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ANKRD49Q8WVL7 239 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ATG10Q9H0Y0 220 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 CCDC177Q9NQR7 707 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 DMGDHQ9UI17 866 aaKnown RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 NOVA2Q9UNW9 492 aaKnown RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 MAN2B2Q9Y2E5 1009 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 MTO1Q9Y2Z2 717 aaKnown RBP17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 CCDC88CQ9P219 2028 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 ANKRD12Q6UB98 2062 aa17.11■□□□□ 0.33
IGHV3-47-201ENST00000425060 FASNP49327 2511 aaKnown RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 PCSK5Q92824 1860 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 HYKKA2RU49 373 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 H7BY64 318 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 CD63P08962 238 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 ENO2P09104 434 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 HIST1H2AGP0C0S8 130 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 HIST1H2ADP20671 130 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 SAT1P21673 171 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 EMP3P54852 163 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 AP1S2P56377 157 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 NAE1Q13564 534 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 PPP1R3AQ16821 1122 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 COX15Q7KZN9 410 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 ARHGEF39Q8N4T4 335 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 DTWD1Q8N5C7 304 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 NKAPQ8N5F7 415 aaKnown RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 NOA1Q8NC60 698 aaKnown RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 OR56A3Q8NH54 315 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 CDKL2Q92772 493 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 ABHD17AQ96GS6 310 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 HIST1H2AHQ96KK5 128 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 PRAP1Q96NZ9 151 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 CPNE1Q99829 537 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 HIST1H2AJQ99878 128 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 H2AFJQ9BTM1 129 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 TRIM55Q9BYV6 548 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 PCBD2Q9H0N5 130 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 POPDC3Q9HBV1 291 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 ABCF3Q9NUQ8 709 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 TMEM184CQ9NVA4 438 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 SH2B3Q9UQQ2 575 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 BOD1L1Q8NFC6 3051 aa17.1■□□□□ 0.33
IGHV3-47-201ENST00000425060 MDC1Q14676 2089 aaKnown RBP17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 HAT1O14929 419 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 ALBP02768 609 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 NPPBP16860 134 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 HRH2P25021 359 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 FOXL2P58012 376 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 POU4F1Q01851 419 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 NFATC3Q12968 1075 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 SSPNQ14714 243 aa17.09■□□□□ 0.33
IGHV3-47-201ENST00000425060 SLC9A5Q14940 896 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms