RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HK3P52790 923 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SRP54P61011 504 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 BNC1Q01954 994 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SLC10A7Q0GE19 358 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 CAMK2GQ13555 558 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 LAMTOR1Q6IAA8 161 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 TMPRSS11AQ6ZMR5 421 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PAQR9Q6ZVX9 377 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FBXO16Q8IX29 292 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 B3GALNT2Q8NCR0 500 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 KBTBD8Q8NFY9 601 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ST8SIA2Q92186 375 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PYURFQ96I23 114 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 GPR21Q99679 349 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 BRINP2Q9C0B6 783 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PDGFCQ9NRA1 345 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 RLIMQ9NVW2 624 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 TNFRSF10DQ9UBN6 386 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 NDRG4Q9ULP0 352 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PCDHGA6Q9Y5G7 932 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 THSD7BQ9C0I4 1608 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 TYW5A2RUC4 315 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SLC2A3P11169 496 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 MAGEA11P43364 429 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 LRRC66Q68CR7 880 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 KDM4DQ6B0I6 523 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 OR2T5Q6IEZ7 315 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PDE12Q6L8Q7 609 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 XRRA1Q6P2D8 792 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FAM171BQ6P995 826 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 GPRIN3Q6ZVF9 776 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ZNF551Q7Z340 670 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SIDT2Q8NBJ9 832 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 OR2T29Q8NH02 315 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 TMCO6Q96DC7 493 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 TMEM80Q96HE8 168 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 MAGEB10Q96LZ2 347 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PPIL3Q9H2H8 161 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ACTL7AQ9Y615 435 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 V9GYH0 126 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PRR35P0CG20 571 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 DENND1CQ8IV53 801 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 GALNT11Q8NCW6 608 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ST13P5Q8NFI4 369 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 NT5C3BQ969T7 300 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FUBP1Q96AE4 644 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SH3KBP1Q96B97 665 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 FCRL5Q96RD9 977 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 SMURF1Q9HCE7 757 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 GALNT9Q9HCQ5 603 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 ZNF304Q9HCX3 659 aa10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 PRMT7Q9NVM4 692 aaPredicted RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 EIF3KQ9UBQ5 218 aaKnown RBP10.97□□□□□ -0.65
SEC61A1-202ENST00000424880 CD3EAPO15446 510 aaKnown RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 UROSP10746 265 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 NPR3P17342 541 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 SSTR2P30874 369 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 BRCC3P46736 316 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 PGFP49763 221 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 SOX4Q06945 474 aaPredicted RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 XKR7Q5GH72 579 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 SHQ1Q6PI26 577 aaKnown RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 ZNF767PQ75MW2 155 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 C16orf62Q7Z3J2 963 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 ARHGAP12Q8IWW6 846 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 LIX1Q8N485 282 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 EEF1AKMT1Q8WVE0 214 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 TOE1Q96GM8 510 aaKnown RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 GPR20Q99678 358 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 ASPNQ9BXN1 380 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 ABHD16BQ9H3Z7 469 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 THUMPD1Q9NXG2 353 aaKnown RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 UXTQ9UBK9 157 aaPredicted RBP10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 PCTPQ9UKL6 214 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 PRKAB1Q9Y478 270 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 PAPPA2Q9BXP8 1791 aa10.96□□□□□ -0.65
SEC61A1-202ENST00000424880 NIPSNAP2O75323 286 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF286BP0CG31 522 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 PYDC2Q56P42 97 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 C9orf57Q5W0N0 161 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 WSCD1Q658N2 575 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 TSPYL5Q86VY4 417 aaPredicted RBP10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 CDC26Q8NHZ8 85 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 STAG3L4Q8TBR4 150 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 ENKURQ8TC29 256 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 PHF21AQ96BD5 680 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 MCCC2Q9HCC0 563 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 TXNRD2Q9NNW7 524 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 MS4A12Q9NXJ0 267 aa10.96□□□□□ -0.66
SEC61A1-202ENST00000424880 CFL2Q9Y281 166 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms