RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TSSK3Q96PN8 268 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 BOCQ9BWV1 1114 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TNKS2Q9H2K2 1166 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TP63Q9H3D4 680 aaPredicted RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 SERHLQ9NQF3 203 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 YBX2Q9Y2T7 364 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 ZNF451Q9Y4E5 1061 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 C2orf81A6NN90 581 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 TGM5O43548 720 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 RFPL2O75678 378 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 VIPP01282 170 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 GADD45AP24522 165 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 CELF2-AS1Q8N7Q2 184 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 PPP3R2Q96LZ3 170 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 EGFL8Q99944 293 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 CPPED1Q9BRF8 314 aaPredicted RBP13.93□□□□□ -0.18
MSH5-206ENST00000423982 CLMPQ9H6B4 373 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 NUDT4Q9NZJ9 180 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 SCML2Q9UQR0 700 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 BACE2Q9Y5Z0 518 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 OR2A25A4D2G3 310 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 RECQL5O94762 991 aaPredicted RBP13.93□□□□□ -0.18
MSH5-206ENST00000423982 OTCP00480 354 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 BCKDHAP12694 445 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 LPOP22079 712 aaPredicted RBP13.93□□□□□ -0.18
MSH5-206ENST00000423982 CRISP3P54108 245 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 IL18R1Q13478 541 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 PCBP2Q15366 365 aaKnown RBP eCLIP13.93□□□□□ -0.182e-9■■■□□ 16.3
MSH5-206ENST00000423982 KDM4DQ6B0I6 523 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 CALHM3Q86XJ0 350 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 NLGN4XQ8N0W4 816 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 APH1BQ8WW43 257 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 EGLN2Q96KS0 407 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 CCSER2Q9H7U1 834 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
MSH5-206ENST00000423982 LOC100506127A0A0U1RQW1 187 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 DRGXA6NNA5 263 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 SLC38A8A6NNN8 435 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 LOC730098B7Z3J9 87 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 FAM47E-STBD1D6RA91 191 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 CTSAP10619 480 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 SLC6A4P31645 630 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 ZC3H12BQ5HYM0 836 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 ZNF697Q5TEC3 545 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 OR2T5Q6IEZ7 315 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 DOK6Q6PKX4 331 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 CCDC80Q76M96 950 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 PLPP6Q8IY26 295 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 SETD9Q8NE22 299 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 OR2T29Q8NH02 315 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 KCNJ9Q92806 393 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 DPH2Q9BQC3 489 aaPredicted RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 CINPQ9BW66 212 aaPredicted RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 LRTM1Q9HBL6 345 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 ANGPTL3Q9Y5C1 460 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 PABPN1LA6NDY0 278 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 GOLGA8CPA6NN73 597 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 M0R082 166 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 IFRD1O00458 451 aaPredicted RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 AIREO43918 545 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 NUAK1O60285 661 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 GRK3P35626 688 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 MAGEA11P43364 429 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 GNPDA1P46926 289 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 TTPAP49638 278 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 HNRNPFP52597 415 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 CPSF6Q16630 551 aaKnown RBP eCLIP13.92□□□□□ -0.18
MSH5-206ENST00000423982 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■□ 21
MSH5-206ENST00000423982 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 SNX20Q7Z614 316 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 HEATR4Q86WZ0 1026 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 ATG16L2Q8NAA4 619 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 ATL1Q8WXF7 558 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 EID2BQ96D98 161 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 TXNDC15Q96J42 360 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 MGME1Q9BQP7 344 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 AGAP5A6NIR3 686 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 AGRPO00253 132 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 DSCR3O14972 297 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 STX7O15400 261 aaKnown RBP13.92□□□□□ -0.18
MSH5-206ENST00000423982 INSIG1O15503 277 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 RGS14O43566 566 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 ULK1O75385 1050 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 IL6P05231 212 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 ALOX12P18054 663 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 PTPN6P29350 595 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 NUDT6P53370 316 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 COPZ1P61923 177 aa13.92□□□□□ -0.18
MSH5-206ENST00000423982 RFX4Q33E94 735 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms