RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 GALNT9Q9HCQ5 603 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 MRPL40Q9NQ50 206 aaKnown RBP5.54□□□□□ -1.52
LINC00458-201ENST00000423442 TRNAU1APQ9NX07 287 aaKnown RBP5.54□□□□□ -1.52
LINC00458-201ENST00000423442 HACD3Q9P035 362 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 FAM153AQ9UHL3 310 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 RSPH14Q9UHP6 348 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 TMEM98Q9Y2Y6 226 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 AAR2Q9Y312 384 aaKnown RBP5.54□□□□□ -1.52
LINC00458-201ENST00000423442 PKP3Q9Y446 797 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 PCDHA3Q9Y5H8 950 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 TEP1Q99973 2627 aaKnown RBP5.54□□□□□ -1.52
LINC00458-201ENST00000423442 NBPF19A0A087WUL8 3843 aa5.54□□□□□ -1.52
LINC00458-201ENST00000423442 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CGB1A6NKQ9 187 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 C2orf81A6NN90 581 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 B4DGG1 531 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 APOC4-APOC2K7ER74 178 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 INPP4BO15327 924 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 PSMD3O43242 534 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 NUDT21O43809 227 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 KATNA1O75449 491 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 NDST3O95803 873 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 APOC2P02655 101 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SLC4A1P02730 911 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 IVLP07476 585 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 VCLP18206 1134 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CTNNA1P35221 906 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 POLD2P49005 469 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SPINT3P49223 89 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 GEMP55040 296 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 EIF3EP60228 445 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CDK3Q00526 305 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 PDE1BQ01064 536 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SRSF4Q08170 494 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 NIPAL4Q0D2K0 466 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 GTF2H3Q13889 308 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 MAP9Q49MG5 647 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TPRG1LQ5T0D9 272 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SLC30A9Q6PML9 568 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 BBS12Q6ZW61 710 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 MARK2Q7KZI7 788 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CHST15Q7LFX5 561 aaPredicted RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TECPR1Q7Z6L1 1165 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 STRA8Q7Z7C7 330 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TSPAN33Q86UF1 283 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 GAS2L3Q86XJ1 694 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 GALNT13Q8IUC8 556 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CDKL3Q8IVW4 592 aaPredicted RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CNTD1Q8N815 330 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 AVL9Q8NBF6 648 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CCDC112Q8NEF3 446 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SPATA22Q8NHS9 363 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 BRSK1Q8TDC3 778 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 OR1E3Q8WZA6 343 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SCAMP4Q969E2 229 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TMEM159Q96B96 161 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SH3KBP1Q96B97 665 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 PTCD3Q96EY7 689 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CCDC3Q9BQI4 270 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 ZSCAN5AQ9BUG6 496 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 MRI1Q9BV20 369 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 OSBPL8Q9BZF1 889 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 DPH1Q9BZG8 443 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 REXO4Q9GZR2 422 aaKnown RBP5.53□□□□□ -1.52
LINC00458-201ENST00000423442 CLPBQ9H078 707 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TRABDQ9H4I3 376 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 POLR1BQ9H9Y6 1135 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 ASCL3Q9NQ33 180 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 GUCA1BQ9UMX6 200 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 TFR2Q9UP52 801 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 SHOC2Q9UQ13 582 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 MYO9AB2RTY4 2548 aa5.53□□□□□ -1.52
LINC00458-201ENST00000423442 hCG_1818297A0A087WSY0 165 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 C5orf60A6NFR6 353 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 OR5K4A6NMS3 321 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GPR89AB7ZAQ6 455 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 KMOO15229 486 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 STX7O15400 261 aaKnown RBP5.52□□□□□ -1.53
LINC00458-201ENST00000423442 KCNN4O15554 427 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GRID2O43424 1007 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 PHF2O75151 1096 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 CDK14O94921 469 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GPANK1O95872 356 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 MT-CYBP00156 380 aaPredicted RBP5.52□□□□□ -1.53
LINC00458-201ENST00000423442 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
LINC00458-201ENST00000423442 FGF1P05230 155 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 RPLP0P05388 317 aaKnown RBP5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GPR89BP0CG08 455 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GIMD1P0DJR0 217 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 RALBP11234 206 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 LHCGRP22888 699 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 SLC6A2P23975 617 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 PTPN3P26045 913 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 STIP1P31948 543 aaKnown RBP5.52□□□□□ -1.53
LINC00458-201ENST00000423442 HMGCLP35914 325 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 ACTR1BP42025 376 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 GPR3P46089 330 aa5.52□□□□□ -1.53
LINC00458-201ENST00000423442 LMAN1P49257 510 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms