RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DYTNA2CJ06 578 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ZNF839A8K0R7 811 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 GOLGA8KD6RF30 607 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 GOLGA8TH3BQL2 631 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 CCNDBP1O95273 360 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ESR1P03372 595 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 CATP04040 527 aaKnown RBP15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ANXA5P08758 320 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 PAMP19021 973 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 CHRM3P20309 590 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ARG2P78540 354 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 Q0VFX4 171 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 FASTKQ14296 549 aaKnown RBP15.39■□□□□ 0.05
COL18A1-205ENST00000423214 KCTD19Q17RG1 926 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ANKRD20A4Q4UJ75 823 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 SUSD1Q6UWL2 747 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 CES3Q6UWW8 571 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 OR9A1PQ8NGU1 263 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 SMPDL3AQ92484 453 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 RERGQ96A58 199 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-205ENST00000423214 MFSD3Q96ES6 412 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 MVB12AQ96EY5 273 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 BIRC8Q96P09 236 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 UTP6Q9NYH9 597 aaKnown RBP15.39■□□□□ 0.05
COL18A1-205ENST00000423214 TRPC4Q9UBN4 977 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ZKSCAN5Q9Y2L8 839 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 CRYL1Q9Y2S2 319 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 PPP2R2CQ9Y2T4 447 aa15.39■□□□□ 0.05
COL18A1-205ENST00000423214 ARHGEF33A8MVX0 844 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 H0YGG7 62 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 LRRTM2O43300 516 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 MATN4O95460 622 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 ERGP11308 486 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 TPSB2P20231 275 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 OGNP20774 298 aaKnown RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 FDXRP22570 491 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 ARNTP27540 789 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 CXCR5P32302 372 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 ARF3P61204 181 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 CDK16Q00536 496 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 EEF1A2Q05639 463 aaKnown RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 DSG2Q14126 1118 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 SIX1Q15475 284 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 TPSAB1Q15661 275 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 VWA2Q5GFL6 755 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 KIAA0930Q6ICG6 404 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 CASC4Q6P4E1 433 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 DRICH1Q6PGQ1 229 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 CSNK1A1LQ8N752 337 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 BCORP1Q8N888 145 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 MMABQ96EY8 250 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 TCF12Q99081 682 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 PLCD4Q9BRC7 762 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 KIFC1Q9BW19 673 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 OLAHQ9NV23 265 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 SAMD15Q9P1V8 674 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 PTGFRNQ9P2B2 879 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 STOX2Q9P2F5 926 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-205ENST00000423214 SOX13Q9UN79 622 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 VPS9D1Q9Y2B5 631 aa15.38■□□□□ 0.05
COL18A1-205ENST00000423214 IGLV3-12A0A075B6K2 115 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 ENO4A6NNW6 628 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 IDSB3KWA1 339 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 MYO1CO00159 1063 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 FFAR3O14843 346 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 GPR42O15529 346 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 CEP104O60308 925 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 FGGP02679 453 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 HEXBP07686 556 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 COX6A1P12074 109 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 TERF1P54274 439 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 PNLIPRP1P54315 467 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 EMP2P54851 167 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 EMP3P54852 163 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 ADARP55265 1226 aaKnown RBP15.37■□□□□ 0.05
COL18A1-205ENST00000423214 YBX1P67809 324 aaKnown RBP15.37■□□□□ 0.05
COL18A1-205ENST00000423214 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
COL18A1-205ENST00000423214 GBX1Q14549 363 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 ARHGAP19Q14CB8 494 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 PRTGQ2VWP7 1150 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 KLHL38Q2WGJ6 581 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 TTLL9Q3SXZ7 439 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 FAAH2Q6GMR7 532 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 LRRC8BQ6P9F7 803 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 NDUFAF7Q7L592 441 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 ADCK2Q7Z695 626 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 OR1N1Q8NGS0 311 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 BRIX1Q8TDN6 353 aaKnown RBP15.37■□□□□ 0.05
COL18A1-205ENST00000423214 LMF1Q96S06 567 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 GRPEL1Q9HAV7 217 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 ABCF3Q9NUQ8 709 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 RIC8BQ9NVN3 520 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 TAC3Q9UHF0 121 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 PCYOX1Q9UHG3 505 aa15.37■□□□□ 0.05
COL18A1-205ENST00000423214 RUVBL1Q9Y265 456 aaKnown RBP15.37■□□□□ 0.05
COL18A1-205ENST00000423214 PCDH17O14917 1159 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms