RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MS4A2Q01362 244 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 BECN1Q14457 450 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MTF1Q14872 753 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 EXT1Q16394 746 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 TMEM266Q2M3C6 531 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MFSD12Q6NUT3 480 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 ARHGAP22Q7Z5H3 698 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 POMGNT2Q8NAT1 580 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 SYN2Q92777 582 aaPredicted RBP3.27□□□□□ -1.89
LINC00397-201ENST00000422074 PTERQ96BW5 349 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 C4orf45Q96LM5 186 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 AGAP4Q96P64 663 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 GCNAQ96QF7 691 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 SPAG5Q96R06 1193 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 LPAR4Q99677 370 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 OVOL2Q9BRP0 275 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 KLHL4Q9C0H6 718 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 ANKZF1Q9H8Y5 726 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 CHST11Q9NPF2 352 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 CLIC5Q9NZA1 410 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MORF4L1Q9UBU8 362 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 C19orf25Q9UFG5 118 aaPredicted RBP3.27□□□□□ -1.89
LINC00397-201ENST00000422074 DDX25Q9UHL0 483 aaKnown RBP3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MUTYHQ9UIF7 546 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 hCG_1809904A0A1W2PP81 198 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 A0A1W2PPE2 198 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 A0A1W2PPM1 405 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 A0A1W2PR64 198 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 C2CD4DB7Z1M9 353 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 P4HA2O15460 535 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 IGHV3-13P01766 116 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 IGHEP01854 428 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 NR2F1P10589 423 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 DNASE1P24855 282 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 LIG4P49917 911 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 ZNF75DP51815 510 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 COX10Q12887 443 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 TAB1Q15750 504 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 PHKG1Q16816 387 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 GARNL3Q5VVW2 1013 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 NAA16Q6N069 864 aaPredicted RBP3.26□□□□□ -1.89
LINC00397-201ENST00000422074 Q6ZR54 194 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 IL17RELQ6ZVW7 336 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 PRPF39Q86UA1 669 aaKnown RBP3.26□□□□□ -1.89
LINC00397-201ENST00000422074 LRRC15Q8TF66 581 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 SNRNP27Q8WVK2 155 aaKnown RBP3.26□□□□□ -1.89
LINC00397-201ENST00000422074 ZNF830Q96NB3 372 aaPredicted RBP3.26□□□□□ -1.89
LINC00397-201ENST00000422074 GAL3ST4Q96RP7 486 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 SOSTQ9BQB4 213 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 CENPOQ9BU64 300 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 RAB11FIP5Q9BXF6 653 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 PANK2Q9BZ23 570 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 TEX10Q9NXF1 929 aaPredicted RBP3.26□□□□□ -1.89
LINC00397-201ENST00000422074 TMED3Q9Y3Q3 217 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 WIPI2Q9Y4P8 454 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 ATRXP46100 2492 aa3.26□□□□□ -1.89
LINC00397-201ENST00000422074 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 SHISA7A6NL88 538 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 BCL2L11O43521 198 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 TIMM44O43615 452 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 ABCB1P08183 1280 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-201ENST00000422074 CAPZA2P47755 286 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 VAMP7P51809 220 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 MAPK12P53778 367 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 AIMP1Q12904 312 aaKnown RBP3.25□□□□□ -1.89
LINC00397-201ENST00000422074 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 NDUFAF2Q8N183 169 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 NME8Q8N427 588 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 LSMEM1Q8N8F7 131 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 POGLUT1Q8NBL1 392 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 SLC37A3Q8NCC5 494 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 OR2L2Q8NH16 312 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 MIPOL1Q8TD10 442 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 CCDC106Q9BWC9 280 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 GPR88Q9GZN0 384 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 HOXD1Q9GZZ0 328 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 OLAHQ9NV23 265 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 FAM120CQ9NX05 1096 aaKnown RBP3.25□□□□□ -1.89
LINC00397-201ENST00000422074 TP53TG3Q9ULZ0 132 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 WDR83OSQ9Y284 106 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 FAM169AQ9Y6X4 670 aa3.25□□□□□ -1.89
LINC00397-201ENST00000422074 A0A087WUV0 522 aaPredicted RBP3.24□□□□□ -1.89
LINC00397-201ENST00000422074 TCRBV21S2A2A0A5A6 115 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 PI4K2BG5E9Z4 385 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 PLOD3O60568 738 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 CAPN2P17655 700 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 XGP55808 180 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 CLDN15P56746 228 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 UBXN2AP68543 259 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 IRX4P78413 519 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 MYL7Q01449 175 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 SLC25A30Q5SVS4 291 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 NOTUMQ6P988 496 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 ZFAND4Q86XD8 727 aa3.24□□□□□ -1.89
LINC00397-201ENST00000422074 MAML2Q8IZL2 1156 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms