RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 XKR4Q5GH76 650 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 ZNF605Q86T29 641 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 GPR151Q8TDV0 419 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 MYDGFQ969H8 173 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 CEP295NLQ96MC4 621 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 PANX1Q96RD7 426 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 FEVQ99581 238 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 SNTG1Q9NSN8 517 aa16.17■□□□□ 0.18
PKP4-204ENST00000421462 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
PKP4-204ENST00000421462 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 ARL5CA6NH57 179 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 FAM220BPB1ANY3 271 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 HAS3O00219 553 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 PBX3P40426 434 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 OR1E2P47887 323 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 RPS14P62263 151 aaKnown RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 STARD3Q14849 445 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 SF1Q15637 639 aaKnown RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 SLC39A12Q504Y0 691 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 SLX4IPQ5VYV7 408 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 PAMR1Q6UXH9 720 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 SLC44A2Q8IWA5 706 aaPredicted RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 SKA2Q8WVK7 121 aaPredicted RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 JPH3Q8WXH2 748 aaPredicted RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 CIPCQ9C0C6 399 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 TMEM184CQ9NVA4 438 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 IMPAD1Q9NX62 359 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 OR6C70A6NIJ9 312 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 IFRD1O00458 451 aaPredicted RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 NUDT7P0C024 238 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 ODC1P11926 461 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 ENGP17813 658 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 SSTR4P31391 388 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 INO80DQ53TQ3 878 aaPredicted RBP16.16■□□□□ 0.18
PKP4-204ENST00000421462 ATG9BQ674R7 924 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 APOLD1Q96LR9 279 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 CLMPQ9H6B4 373 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 RLIMQ9NVW2 624 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 SPASTQ9UBP0 616 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 MKLN1Q9UL63 735 aa16.16■□□□□ 0.18
PKP4-204ENST00000421462 ERVH48-1M5A8F1 160 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SCAMP3O14828 347 aaKnown RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 KLK8O60259 260 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 TSC22D2O75157 780 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CCNDBP1O95273 360 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 IFNA8P32881 189 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 UGT2B10P36537 528 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 ZNF140P52738 457 aaPredicted RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 PTCHD3Q3KNS1 767 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 WDR45BQ5MNZ6 344 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SLC38A6Q8IZM9 456 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 KLHDC9Q8NEP7 349 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 ANKHQ9HCJ1 492 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 COQ3Q9NZJ6 369 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 GOLGA4Q13439 2230 aaKnown RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 A0A0G2JLL6 359 aaPredicted RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 GRXCR2A6NFK2 248 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 MRPL19P49406 292 aaKnown RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 TWF1Q12792 350 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 C10orf120Q5SQS8 335 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 PRRT2Q7Z6L0 340 aaPredicted RBP16.15■□□□□ 0.18
PKP4-204ENST00000421462 LAX1Q8IWV1 398 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CAMKK1Q8N5S9 505 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 OR2A14Q96R47 310 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 BOCQ9BWV1 1114 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 C1QTNF3Q9BXJ4 246 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 MS4A12Q9NXJ0 267 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 PSORS1C1Q9UIG5 152 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 DUSP12Q9UNI6 340 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CLIC1O00299 241 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CKMT1AP12532 417 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 BMP1P13497 986 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CTPS1P17812 591 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 KRT6CP48668 564 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SERINC3Q13530 473 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SBSNQ6UWP8 590 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SELENOMQ8WWX9 145 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 SERHLQ9NQF3 203 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 ABCB8Q9NUT2 735 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 FAM105AQ9NUU6 356 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 NUDT4Q9NZJ9 180 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CCL27Q9Y4X3 112 aa16.15■□□□□ 0.18
PKP4-204ENST00000421462 CLCA1A8K7I4 914 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 TAPBPO15533 448 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 CDK1P06493 297 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 KDELR2P33947 212 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 NKX3-2P78367 333 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 EIF4EBP2Q13542 120 aaPredicted RBP16.14■□□□□ 0.17
PKP4-204ENST00000421462 DDX39BQ13838 428 aaKnown RBP16.14■□□□□ 0.17
PKP4-204ENST00000421462 DNAJC22Q8N4W6 341 aa16.14■□□□□ 0.17
PKP4-204ENST00000421462 GLB1L3Q8NCI6 653 aaPredicted RBP16.14■□□□□ 0.17
PKP4-204ENST00000421462 GTPBP3Q969Y2 492 aaKnown RBP16.14■□□□□ 0.17
PKP4-204ENST00000421462 CINPQ9BW66 212 aaPredicted RBP16.14■□□□□ 0.17
PKP4-204ENST00000421462 TMEM248Q9NWD8 314 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms