RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CRISP3P54108 245 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SRP54P61011 504 aaKnown RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ABATP80404 500 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 DSC3Q14574 896 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 C8orf59Q8N0T1 100 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CABIN1Q9Y6J0 2220 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 A0A0G2JN53 185 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CLOCKO15516 846 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CYP17A1P05093 508 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 WDTC1Q8N5D0 677 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 PIGXQ8TBF5 258 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ELSPBP1Q96BH3 223 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TRIB3Q96RU7 358 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CMKLR1Q99788 373 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 POPDC3Q9HBV1 291 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 NUP214P35658 2090 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SPAG17Q6Q759 2223 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 RFXAPO00287 272 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SNX4O95219 450 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 UBTFL6P0CB48 400 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CD38P28907 300 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TMED10P49755 219 aaKnown RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CASP9P55211 416 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ITGA1P56199 1179 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 DUSP6Q16828 381 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TMEM154Q6P9G4 183 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 PQLC3Q8N755 202 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 PPM1HQ9ULR3 514 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 OARD1Q9Y530 152 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TRIM43BA6NCK2 446 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 IFNW1P05000 195 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 FGL2Q14314 439 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 HORMAD2Q8N7B1 307 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 OR4C6Q8NH72 309 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TRIM43Q96BQ3 446 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CDK15Q96Q40 435 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SLC29A3Q9BZD2 475 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SLC2A6Q9UGQ3 507 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 A0A1W2PRB8 838 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF726A6NNF4 738 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 PTGES3LE9PB15 166 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CD72P21854 359 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 PSMB9P28065 219 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 GSCP56915 257 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ERVK-8P63133 956 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 DCST1Q5T197 706 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ZCCHC12Q6PEW1 402 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TBC1D21Q8IYX1 336 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 C3orf58Q8NDZ4 430 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CEP76Q8TAP6 659 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 LRRC15Q8TF66 581 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SCAMP4Q969E2 229 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 EFHD2Q96C19 240 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF689Q96CS4 500 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 RANBP9Q96S59 729 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 FIZ1Q96SL8 496 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TBC1D17Q9HA65 648 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SH3GLB1Q9Y371 365 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 K7ERQ8 282 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 KIAA0319Q5VV43 1072 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 TANGO2Q6ICL3 276 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 C19orf18Q8NEA5 215 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 MYLIPQ8WY64 445 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SCRN2Q96FV2 425 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
PTCH1-206ENST00000421141 SEMA6AQ9H2E6 1030 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 B3GAT2Q9NPZ5 323 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 GMPPBQ9Y5P6 360 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CXCR1P25024 350 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 S100GP29377 79 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 LIPJQ5W064 366 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ASPGQ86U10 573 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 KIAA1191Q96A73 305 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 C8orf4Q9NR00 106 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 TAS2R9Q9NYW1 312 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 EGFL7Q9UHF1 273 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ELOA3DA6NLF2 546 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-206ENST00000421141 KCNJ5P48544 419 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 NDUFAF6Q330K2 333 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ELOA3BQ3SY89 546 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 TIMM50Q3ZCQ8 353 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 FAM180AQ6UWF9 173 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ELOA3Q8NG57 546 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
PTCH1-206ENST00000421141 DAZLQ92904 295 aaKnown RBP10.43□□□□□ -0.74
PTCH1-206ENST00000421141 PNPLA2Q96AD5 504 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 C7orf26Q96N11 449 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 MGME1Q9BQP7 344 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 KLHL25Q9H0H3 589 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 IL1RAPQ9NPH3 570 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 ACSS2Q9NR19 701 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 TBC1D23Q9NUY8 699 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 SCN2AQ99250 2005 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 TP53I11O14683 189 aa10.43□□□□□ -0.74
PTCH1-206ENST00000421141 BCAT2O15382 392 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-206ENST00000421141 PLIN3O60664 434 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms