RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SLC5A6Q9Y289 635 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 NTNG1Q9Y2I2 539 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 CSAG2Q9Y5P2 127 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 FAM237BA0A1B0GVD1 139 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 MAGEB16A2A368 324 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 ZNF839A8K0R7 811 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 H0YGG7 62 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 MAP2K7O14733 419 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 PRPF4O43172 522 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■■■■■ 27.6
MSH6-203ENST00000420813 CCNDBP1O95273 360 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 LDLRP01130 860 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 EIF2S1P05198 315 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 MLNP12872 115 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 ACPPP15309 386 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 FBLP22087 321 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 RPA3P35244 121 aaPredicted RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 ARF3P61204 181 aaPredicted RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 YBX1P67809 324 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 RELAQ04206 551 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 GPS1Q13098 491 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 HIF1AQ16665 826 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 TTLL9Q3SXZ7 439 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 HIST2H2BCQ6DN03 193 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 CASC4Q6P4E1 433 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 CAND1Q86VP6 1230 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 PAQR7Q86WK9 346 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 PARP9Q8IXQ6 854 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 FBXO15Q8NCQ5 510 aaPredicted RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 ST6GALNAC3Q8NDV1 305 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 FAM136AQ96C01 138 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 THOC3Q96J01 351 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
MSH6-203ENST00000420813 TSR3Q9UJK0 312 aaKnown RBP16.55■□□□□ 0.24
MSH6-203ENST00000420813 CENPEQ02224 2701 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 SCN2AQ99250 2005 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 AVILO75366 819 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 USP1O94782 785 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 CXCR5P32302 372 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 VPS41P49754 854 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 CLCN7P51798 805 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 PNLIPRP1P54315 467 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 PRDX1Q06830 199 aaKnown RBP16.54■□□□□ 0.24
MSH6-203ENST00000420813 Q0VFX4 171 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 DSG2Q14126 1118 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 DHX34Q14147 1143 aaKnown RBP16.54■□□□□ 0.24
MSH6-203ENST00000420813 TLR1Q15399 786 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 TRIP13Q15645 432 aaPredicted RBP16.54■□□□□ 0.24
MSH6-203ENST00000420813 GARNL3Q5VVW2 1013 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ICE2Q659A1 982 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ATG9BQ674R7 924 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ZNF470Q6ECI4 717 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ZNF425Q6IV72 752 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 SUSD1Q6UWL2 747 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ISLR2Q6UXK2 745 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 MCUQ8NE86 351 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 CABS1Q96KC9 395 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 C5orf34Q96MH7 638 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 LMF1Q96S06 567 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 XAB2Q9HCS7 855 aaKnown RBP16.54■□□□□ 0.24
MSH6-203ENST00000420813 C14orf105Q9NVL8 296 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 C3orf18Q9UK00 162 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 ITPR2Q14571 2701 aa16.54■□□□□ 0.24
MSH6-203ENST00000420813 IGKV1-8A0A0C4DH67 115 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 A0A1W2PQ72 361 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 SDR42E2A6NKP2 422 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 TXNDC9O14530 226 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 PCDH17O14917 1159 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 KRT14P02533 472 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 ENO3P13929 434 aaPredicted RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 EZRP15311 586 aaKnown RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 FDXRP22570 491 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 ABATP80404 500 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 MFAP5Q13361 173 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 ZNF169Q14929 603 aaPredicted RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 ANKRD22Q5VYY1 191 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 MAMDC2Q7Z304 686 aaPredicted RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 LMNTD2Q8IXW0 634 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 CSNK1A1LQ8N752 337 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 KCNJ9Q92806 393 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 ZNF669Q96BR6 464 aaPredicted RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 OR2A5Q96R48 311 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 PKP4Q99569 1192 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 CCDC68Q9H2F9 335 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 TAC3Q9UHF0 121 aa16.53■□□□□ 0.24
MSH6-203ENST00000420813 RUVBL1Q9Y265 456 aaKnown RBP16.53■□□□□ 0.24
MSH6-203ENST00000420813 A1L4Q6 167 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 CTAGE9A4FU28 777 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 SLC16A8O95907 504 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 MPC1LP0DKB6 136 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 TERF1P54274 439 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 CDC16Q13042 620 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 THOC5Q13769 683 aaKnown RBP16.52■□□□□ 0.24
MSH6-203ENST00000420813 VWA2Q5GFL6 755 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 NDUFAF7Q7L592 441 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 KCNMB4Q86W47 210 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.24
MSH6-203ENST00000420813 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms