RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 PGDP52209 483 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 EMP3P54852 163 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 KCNC4Q03721 635 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 PDIA2Q13087 525 aaKnown RBP15.74■□□□□ 0.11
LINC00404-201ENST00000418660 COX15Q7KZN9 410 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 MRGPREQ86SM8 312 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 ANKMY2Q8IV38 441 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 MYO1HQ8N1T3 1032 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 SPATA4Q8NEY3 305 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 CCDC138Q96M89 665 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 EPN3Q9H201 632 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 SLC26A1Q9H2B4 701 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 WDR54Q9H977 334 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 PARVBQ9HBI1 364 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 ADAMTS6Q9UKP5 1117 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 G3BP2Q9UN86 482 aaKnown RBP15.74■□□□□ 0.11
LINC00404-201ENST00000418660 PDE10AQ9Y233 779 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 VWA7Q9Y334 891 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 SPTA1P02549 2419 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FAM187AA6NFU0 413 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 H0YGG7 62 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 UMODP07911 640 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 EZRP15311 586 aaKnown RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 CASQ1P31415 396 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 OR1D4P47884 311 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 IL2P60568 153 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ARF3P61204 181 aaPredicted RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ETF1P62495 437 aaKnown RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 SP140Q13342 867 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 PDAP1Q13442 181 aaKnown RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 NKG7Q16617 165 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 PRTGQ2VWP7 1150 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 THEMIS2Q5TEJ8 643 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 HECTD2Q5U5R9 776 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FAM45BPQ6NSW5 357 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 PRMT9Q6P2P2 845 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 MAATS1Q7Z4T9 603 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 GPATCH11Q8N954 259 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FBXO36Q8NEA4 188 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FAM45AQ8TCE6 357 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 NACC2Q96BF6 587 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 LINGO1Q96FE5 620 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FER1L6-AS2Q96M78 137 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 OR2A5Q96R48 311 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ERP44Q9BS26 406 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ZNF304Q9HCX3 659 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 CCDC177Q9NQR7 707 aaPredicted RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 ABCF3Q9NUQ8 709 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 MOCS1Q9NZB8 636 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 STOX2Q9P2F5 926 aaPredicted RBP15.73■□□□□ 0.11
LINC00404-201ENST00000418660 PCDHGB7Q9Y5F8 929 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 BOD1L1Q8NFC6 3051 aa15.73■□□□□ 0.11
LINC00404-201ENST00000418660 FER1L5A0AVI2 2057 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 MED26O95402 600 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 FDXRP22570 491 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 FOXL2P58012 376 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 MRPS25P82663 173 aaKnown RBP15.72■□□□□ 0.11
LINC00404-201ENST00000418660 MGAT5Q09328 741 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 MUM1Q2TAK8 710 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 PPP1R32Q7Z5V6 425 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 TMEM151BQ8IW70 566 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 C17orf53Q8N3J3 647 aaPredicted RBP15.72■□□□□ 0.11
LINC00404-201ENST00000418660 METTL27Q8N6F8 245 aaPredicted RBP15.72■□□□□ 0.11
LINC00404-201ENST00000418660 FDCSPQ8NFU4 85 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 SPSB2Q99619 263 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 PCBD2Q9H0N5 130 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 CLMPQ9H6B4 373 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 CUEDC1Q9NWM3 386 aaPredicted RBP15.72■□□□□ 0.11
LINC00404-201ENST00000418660 P4HTMQ9NXG6 502 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 WHRNQ9P202 907 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 ZFATQ9P243 1243 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 NXT1Q9UKK6 140 aaKnown RBP15.72■□□□□ 0.11
LINC00404-201ENST00000418660 ZNF451Q9Y4E5 1061 aa15.72■□□□□ 0.11
LINC00404-201ENST00000418660 PCSK5Q92824 1860 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 SEC16AO15027 2179 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 A6NL46 340 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 VSTM2BA6NLU5 285 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 TXNDC9O14530 226 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 ZIC2O95409 532 aaPredicted RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 TSPAN12O95859 305 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 HIST1H2AGP0C0S8 130 aaPredicted RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 HIST1H2ADP20671 130 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 MMP11P24347 488 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 HRH2P25021 359 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 TBPL1P62380 186 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 CALCOCO2Q13137 446 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 FASTKD3Q14CZ7 662 aaKnown RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 DCAF10Q5QP82 559 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 PRAMEF13Q5VWM6 474 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 AGTRAPQ6RW13 159 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 ADCK2Q7Z695 626 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 HPS6Q86YV9 775 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 DTWD1Q8N5C7 304 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 CSNK1A1LQ8N752 337 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 CLEC1AQ8NC01 280 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 RERGQ96A58 199 aaPredicted RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 COL26A1Q96A83 441 aa15.71■□□□□ 0.11
LINC00404-201ENST00000418660 PDLIM5Q96HC4 596 aaKnown RBP15.71■□□□□ 0.11
LINC00404-201ENST00000418660 CABS1Q96KC9 395 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms