RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TEX51A0A1B0GUA7 166 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 TRIM49D1C9J1S8 452 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 RRP8O43159 456 aaKnown RBP17.88■□□□□ 0.45
PTCD3-204ENST00000418628 CPNE3O75131 537 aaKnown RBP17.88■□□□□ 0.45
PTCD3-204ENST00000418628 SCRG1O75711 98 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 KLHL2O95198 593 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 ANXA5P08758 320 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 NPPBP16860 134 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 TYK2P29597 1187 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 GGT5P36269 586 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 STAT5AP42229 794 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 TAF1BQ53T94 588 aaPredicted RBP17.88■□□□□ 0.45
PTCD3-204ENST00000418628 PRAMEF17Q5VTA0 474 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 CAPN13Q6MZZ7 669 aaPredicted RBP17.88■□□□□ 0.45
PTCD3-204ENST00000418628 EMBQ6PCB8 327 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 TIFABQ6ZNK6 161 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 RAPH1Q70E73 1250 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 CNPY4Q8N129 248 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 ESX1Q8N693 406 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 RHEBL1Q8TAI7 183 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 CAVIN3Q969G5 261 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 NXNL1Q96CM4 212 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 NAF1Q96HR8 494 aaKnown RBP17.88■□□□□ 0.45
PTCD3-204ENST00000418628 TMEM79Q9BSE2 394 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 MED13Q9UHV7 2174 aa17.88■□□□□ 0.45
PTCD3-204ENST00000418628 FAM208BQ5VWN6 2430 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 FITM1A5D6W6 292 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 KERAO60938 352 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 RFPL1O75677 317 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 SHBGP04278 402 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 SNRPAP09012 282 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 MTHFD2P13995 350 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 EZRP15311 586 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TFEBP19484 476 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 HRH2P25021 359 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 ABHD18Q0P651 414 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 GPS2Q13227 327 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TSTA3Q13630 321 aaPredicted RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 RASA2Q15283 850 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 ZC3H12BQ5HYM0 836 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 FRA10AC1Q70Z53 315 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TDRPQ86YL5 185 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TMEM126BQ8IUX1 230 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 MCATQ8IVS2 390 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 PLD6Q8N2A8 252 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TCAIMQ8N3R3 496 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 GALNT6Q8NCL4 622 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 ABHD11Q8NFV4 315 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 SNRNP27Q8WVK2 155 aaKnown RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 PYCR2Q96C36 320 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 MTBPQ96DY7 904 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 MED8Q96G25 268 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 ZFYVE21Q9BQ24 234 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 HAUS8Q9BT25 410 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 SARGQ9BW04 601 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 ALG9Q9H6U8 611 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 TMEM184CQ9NVA4 438 aa17.87■□□□□ 0.45
PTCD3-204ENST00000418628 PSMC3IPQ9P2W1 217 aaPredicted RBP17.87■□□□□ 0.45
PTCD3-204ENST00000418628 NBEAQ8NFP9 2946 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 PABPN1LA6NDY0 278 aaKnown RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 E7EQ34 232 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 TAPBPO15533 448 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 ZSCAN9O15535 394 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 KLK10O43240 276 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 OR2B3O76000 313 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 KRT37O76014 449 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 MT-ND3P03897 115 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 NUDT17P0C025 328 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 HSD17B3P37058 310 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 ATP1A2P50993 1020 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 SRSF6Q13247 344 aaKnown RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 TECRLQ5HYJ1 363 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 FRMPD2BQ6IN97 320 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 FBXO42Q6P3S6 717 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 TLDC1Q6P9B6 456 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 C6orf15Q6UXA7 325 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 LRRC69Q6ZNQ3 347 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 C17orf64Q86WR6 236 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 GPSM1Q86YR5 675 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 CACNA2D3Q8IZS8 1091 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 DSELQ8IZU8 1212 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 MREGQ8N565 214 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 OR4K1Q8NGD4 311 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 STAG3L4Q8TBR4 150 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 UBTD2Q8WUN7 234 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 UBLCP1Q8WVY7 318 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 OR2A5Q96R48 311 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 PARD6BQ9BYG5 372 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 SPRTNQ9H040 489 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 PPCSQ9HAB8 311 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 PCMTD2Q9NV79 361 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 NUDT4Q9NZJ9 180 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 SERTAD3Q9UJW9 196 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 PTBP2Q9UKA9 531 aaKnown RBP17.86■□□□□ 0.45
PTCD3-204ENST00000418628 SNX7Q9UNH6 387 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 AP1M2Q9Y6Q5 423 aa17.86■□□□□ 0.45
PTCD3-204ENST00000418628 HAT1O14929 419 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 EFSO43281 561 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 ZNF749O43361 778 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms