RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.75□□□□□ -0.21
PAF1-202ENST00000416728 FBXO42Q6P3S6 717 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 FAM180AQ6UWF9 173 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 SUSD1Q6UWL2 747 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 LMF1Q96S06 567 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 YIPF2Q9BWQ6 316 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 TRPC4Q9UBN4 977 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 SOX13Q9UN79 622 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 OSGIN2Q9Y236 505 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 PRRC2CQ9Y520 2896 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 ANKRD12Q6UB98 2062 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 MYO1CO00159 1063 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 PSIP1O75475 530 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 KLHL18O94889 574 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 CATP04040 527 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 PAMP19021 973 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 CXCR2P25025 360 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 KCNJ1P48048 391 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 EMP2P54851 167 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 ARG2P78540 354 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 DSG2Q14126 1118 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 KLHL38Q2WGJ6 581 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 ACSBG2Q5FVE4 666 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 ATG9BQ674R7 924 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 KIAA0930Q6ICG6 404 aaPredicted RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 NDUFAF7Q7L592 441 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 LAPTM4BQ86VI4 370 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 CSNK1A1LQ8N752 337 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 CATSPER1Q8NEC5 780 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 C14orf105Q9NVL8 296 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 UTP6Q9NYH9 597 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 TAC3Q9UHF0 121 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 RUVBL1Q9Y265 456 aaKnown RBP13.74□□□□□ -0.21
PAF1-202ENST00000416728 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
PAF1-202ENST00000416728 TCRBV7S3A2A0A539 114 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 DYTNA2CJ06 578 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 IDSB3KWA1 339 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 LRRTM2O43300 516 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 CCNDBP1O95273 360 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 UQCRHP07919 91 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 ANXA5P08758 320 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 COX6A1P12074 109 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
PAF1-202ENST00000416728 FDXRP22570 491 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 HSD17B2P37059 387 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 TERF1P54274 439 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 SARNPP82979 210 aaKnown RBP13.73□□□□□ -0.21
PAF1-202ENST00000416728 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
PAF1-202ENST00000416728 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 PAQR7Q86WK9 346 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 BCORP1Q8N888 145 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 OR1N1Q8NGS0 311 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 RERGQ96A58 199 aaPredicted RBP13.73□□□□□ -0.21
PAF1-202ENST00000416728 MMABQ96EY8 250 aaPredicted RBP13.73□□□□□ -0.21
PAF1-202ENST00000416728 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 OLAHQ9NV23 265 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 GALPQ9UBC7 116 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 NUP210LQ5VU65 1888 aa13.73□□□□□ -0.21
PAF1-202ENST00000416728 POLEQ07864 2286 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 IGKV1-8A0A0C4DH67 115 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 FFAR3O14843 346 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 GPR42O15529 346 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 SERPINA7P05543 415 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 HEXBP07686 556 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 PRR35P0CG20 571 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 EZRP15311 586 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 VPS41P49754 854 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 PNLIPRP1P54315 467 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 EEF1A2Q05639 463 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 PRDX1Q06830 199 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 HKDC1Q2TB90 917 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 GARNL3Q5VVW2 1013 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 ICE2Q659A1 982 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 CENPUQ71F23 418 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 BRIX1Q8TDN6 353 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 MAGEB10Q96LZ2 347 aaPredicted RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 OR2A5Q96R48 311 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 PKP4Q99569 1192 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 SLX1AQ9BQ83 275 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 DRC3Q9H069 523 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 LZTFL1Q9NQ48 299 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 RIC8BQ9NVN3 520 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms