RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TMEM205Q6UW68 189 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 KRT222Q8N1A0 295 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 IMMP1LQ96LU5 166 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 PANX3Q96QZ0 392 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 P2RY12Q9H244 342 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 MKKSQ9NPJ1 570 aaPredicted RBP14.63□□□□□ -0.07
DDX56-202ENST00000415758 STOX2Q9P2F5 926 aaPredicted RBP14.63□□□□□ -0.07
DDX56-202ENST00000415758 TRPC4Q9UBN4 977 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 TTC7AQ9ULT0 858 aaPredicted RBP14.63□□□□□ -0.07
DDX56-202ENST00000415758 PCDHGB6Q9Y5F9 930 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 NFS1Q9Y697 457 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 DUSP10Q9Y6W6 482 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 MED13LQ71F56 2210 aa14.63□□□□□ -0.07
DDX56-202ENST00000415758 OR5H15A6NDH6 313 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 H0YGG7 62 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 F10P00742 488 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 CELA2AP08217 269 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ERVK-10P10266 1014 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ITGAMP11215 1152 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 STIP1P31948 543 aaKnown RBP14.62□□□□□ -0.07
DDX56-202ENST00000415758 CCNFP41002 786 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 TTPAP49638 278 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ARF3P61204 181 aaPredicted RBP14.62□□□□□ -0.07
DDX56-202ENST00000415758 YBX1P67809 324 aaKnown RBP14.62□□□□□ -0.07
DDX56-202ENST00000415758 PRAMEP78395 509 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ADORA2A-AS1P86434 159 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 PCOLCEQ15113 449 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 GARNL3Q5VVW2 1013 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ARHGEF39Q8N4T4 335 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 AMER3Q8N944 861 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 LRRC57Q8N9N7 239 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 SUN3Q8TAQ9 357 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 GSDMBQ8TAX9 411 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 MAGEC3Q8TD91 643 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 DPH7Q9BTV6 452 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 STMN3Q9NZ72 180 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 SPATA7Q9P0W8 599 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 ANAPC5Q9UJX4 755 aa14.62□□□□□ -0.07
DDX56-202ENST00000415758 SCN2AQ99250 2005 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 SLC19A2O60779 497 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 MATN4O95460 622 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 HEXBP07686 556 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 SNRPB2P08579 225 aaKnown RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 ERGP11308 486 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 CMPK1P30085 196 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 SSTR2P30874 369 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 CYLC1P35663 651 aaPredicted RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 GRIA1P42261 906 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 CASP6P55212 293 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 RELAQ04206 551 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 EEF1A2Q05639 463 aaKnown RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 TESK1Q15569 626 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 ABHD17BQ5VST6 288 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 PTRHD1Q6GMV3 140 aaKnown RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 LDB1Q86U70 411 aaPredicted RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 LRRC6Q86X45 466 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 TAB3Q8N5C8 712 aaPredicted RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 ADAMTS18Q8TE60 1221 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 THAP3Q8WTV1 239 aaPredicted RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 PLCD4Q9BRC7 762 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 TUBB6Q9BUF5 446 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 ETNK1Q9HBU6 452 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 MARCH4Q9P2E8 410 aaPredicted RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 TEKT2Q9UIF3 430 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 GNPTGQ9UJJ9 305 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 RUVBL1Q9Y265 456 aaKnown RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 R3HDM2Q9Y2K5 976 aaKnown RBP14.61□□□□□ -0.07
DDX56-202ENST00000415758 ZNF835Q9Y2P0 537 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 TCAF1Q9Y4C2 921 aa14.61□□□□□ -0.07
DDX56-202ENST00000415758 CACNA1CQ13936 2221 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 KRT87PA6NCN2 255 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 FOXS1O43638 330 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 VPS26AO75436 327 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 KRT38O76015 456 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 WISP2O76076 250 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 CAPN3P20807 821 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 RPS3P23396 243 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■□□ 17.3
DDX56-202ENST00000415758 FDFT1P37268 417 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 BDKRB1P46663 353 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 FASTKQ14296 549 aaKnown RBP14.6□□□□□ -0.07
DDX56-202ENST00000415758 FAAH2Q6GMR7 532 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 H3F3CQ6NXT2 135 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 Q6ZPB1 254 aaPredicted RBP14.6□□□□□ -0.07
DDX56-202ENST00000415758 OTOAQ7RTW8 1153 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 PAQR7Q86WK9 346 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 MMABQ96EY8 250 aaPredicted RBP14.6□□□□□ -0.07
DDX56-202ENST00000415758 FOPNLQ96NB1 174 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 OR2A5Q96R48 311 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 SYNPO2LQ9H987 977 aa14.6□□□□□ -0.07
DDX56-202ENST00000415758 EPN1Q9Y6I3 576 aaPredicted RBP14.6□□□□□ -0.07
DDX56-202ENST00000415758 IGKV1-8A0A0C4DH67 115 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 GRID2IPA4D2P6 1211 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 FFAR3O14843 346 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 CD3EAPO15446 510 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 GPR42O15529 346 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 UQCRHP07919 91 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms