RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 BBS12Q6ZW61 710 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 PIWIL4Q7Z3Z4 852 aaKnown RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 GKN2Q86XP6 184 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 FRS2Q8WU20 508 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CMKLR1Q99788 373 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 SSX3Q99909 188 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 GRHPRQ9UBQ7 328 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 NEXMIFQ5QGS0 1516 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 AIREO43918 545 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 NDST3O95803 873 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 PVALBP20472 110 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GABRB2P47870 512 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SLC5A9Q2M3M2 681 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 EIPR1Q53HC9 387 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RBM4BQ9BQ04 359 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SLC35A5Q9BS91 424 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RBM4Q9BWF3 364 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 ZCCHC3Q9NUD5 404 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RHBDL3P58872 404 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RPS24P62847 133 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SCGB2A2Q13296 93 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 PAQR7Q86WK9 346 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 CLEC4CQ8WTT0 213 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 LRMDAQ9H2I8 198 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SOX14O95416 240 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RAB4AP20338 218 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 PPA1Q15181 289 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 FAM76BQ5HYJ3 339 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 TRIM74Q86UV6 250 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 ZDHHC21Q8IVQ6 265 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 TRIB2Q92519 343 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 A0A1W2PRB8 838 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 C5orf60A6NFR6 353 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 CAPN8A6NHC0 703 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SOX30O94993 753 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GSTT2BP0CG30 244 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GKP32189 559 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GRM5P41594 1212 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 MEF2AQ02078 507 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF550Q7Z398 422 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 MAN2C1Q9NTJ4 1040 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 AOC1P19801 751 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 XKP51811 444 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 ECT2LQ008S8 904 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 CD83Q01151 205 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GBE1Q04446 702 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SLC6A7Q99884 636 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 KCNH6Q9H252 994 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 DENND2DQ9H6A0 471 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 IFT80Q9P2H3 777 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 DNMT3AQ9Y6K1 912 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 NEMP2A6NFY4 417 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 SOX2P48431 317 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 GNG2P59768 71 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 ZBED6CLQ96FA7 236 aaPredicted RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 CSPG4P5Q96PW8 444 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 DUSP9Q99956 384 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 UNC93B1Q9H1C4 597 aa18.04■□□□□ 0.48
SHANK3-202ENST00000414786 RC3H2Q9HBD1 1191 aaKnown RBP18.04■□□□□ 0.48
SHANK3-202ENST00000414786 A0A0A6YYH2 397 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 A6NJ64 397 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 SLC39A4Q6P5W5 647 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF225Q9UK10 706 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 CLCN4P51793 760 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 FMO1Q01740 532 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 LPGAT1Q92604 370 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 NSMAFQ92636 917 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 PNPLA2Q96AD5 504 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 SAR1AQ9NR31 198 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 TDP1Q9NUW8 608 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 SLC17A6Q9P2U8 582 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 MYBPHLA2RUH7 354 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 DLDP09622 509 aaKnown RBP18.03■□□□□ 0.48
SHANK3-202ENST00000414786 C2P06681 752 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 CPXM1Q96SM3 734 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 NUFIP1Q9UHK0 495 aaKnown RBP18.03■□□□□ 0.48
SHANK3-202ENST00000414786 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 OGDHQ02218 1023 aa18.03■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF761Q86XN6 746 aaPredicted RBP18.03■□□□□ 0.48
SHANK3-202ENST00000414786 RBMS1P29558 406 aaKnown RBP18.02■□□□□ 0.48
SHANK3-202ENST00000414786 AIMP2Q13155 320 aaKnown RBP18.02■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF267Q14586 743 aaPredicted RBP18.02■□□□□ 0.48
SHANK3-202ENST00000414786 TEX44Q53QW1 395 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 MBLAC2Q68D91 279 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 IL1RAPQ9NPH3 570 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 ARL8BQ9NVJ2 186 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 IL20RAQ9UHF4 553 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 WNT9AO14904 365 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 DIRAS1O95057 198 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 SERPINA6P08185 405 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 GGT5P36269 586 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 GDPD4Q6W3E5 623 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 OR13C4Q8NGS5 318 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 LAMP5Q9UJQ1 280 aa18.02■□□□□ 0.48
SHANK3-202ENST00000414786 ADAM18Q9Y3Q7 739 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms