RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MSH3P20585 1137 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 MSNP26038 577 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 MGAT1P26572 445 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ALDH4A1P30038 563 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 STIP1P31948 543 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 DUSP3P51452 185 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 SHC2P98077 582 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 XIAPP98170 497 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CDH17Q12864 832 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NFATC2Q13469 925 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ITGA9Q13797 1035 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NFE2L1Q14494 772 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 C14orf28Q4W4Y0 310 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 C3orf38Q5JPI3 329 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PDPK2PQ6A1A2 396 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 DUS1LQ6P1R4 473 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 PGBD2Q6P3X8 592 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 TRMT10BQ6PF06 316 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 DRICH1Q6PGQ1 229 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 TMEM220Q6QAJ8 160 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CES3Q6UWW8 571 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NAPRTQ6XQN6 538 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CCNI2Q6ZMN8 369 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 FAM83HQ6ZRV2 1179 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 TAS2R42Q7RTR8 314 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 LINC00523Q86TU6 105 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 LDB1Q86U70 411 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 LRRTM4Q86VH4 590 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SERPINA9Q86WD7 417 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ZNF547Q8IVP9 402 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 KLHL7Q8IXQ5 586 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 KLHDC8BQ8IXV7 354 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SYTL1Q8IYJ3 562 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 MPP5Q8N3R9 675 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ARL14Q8N4G2 192 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 LILRA3Q8N6C8 439 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 LINC00482Q8N8I6 264 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 RNF152Q8N8N0 203 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PPHLN1Q8NEY8 458 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 ACTRT1Q8TDG2 376 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SLC37A2Q8TED4 501 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 MZB1Q8WU39 189 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 RNF31Q96EP0 1072 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SGF29Q96ES7 293 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ATXN7L3BQ96GX2 97 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PKNOX2Q96KN3 472 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 TBATAQ96M53 351 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 TTC25Q96NG3 672 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PPP1R2P1Q96PQ5 205 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 VPS35Q96QK1 796 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NAPGQ99747 312 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 MRPL46Q9H2W6 279 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 RDH14Q9HBH5 336 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 LANCL2Q9NS86 450 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NLE1Q9NVX2 485 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 VPS18Q9P253 973 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 LRIT1Q9P2V4 623 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 GTF2A1LQ9UNN4 478 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CLCA2Q9UQC9 943 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 VWA7Q9Y334 891 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 NEUROG3Q9Y4Z2 214 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PCDHGA1Q9Y5H4 931 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SLC30A1Q9Y6M5 507 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 ANKRD11Q6UB99 2663 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 A0A1W2PQM1 296 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CTAGE9A4FU28 777 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TRABD2BA6NFA1 517 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 OR52A4PA6NMU1 304 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ERI2A8K979 691 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 GOLGA8KD6RF30 607 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GOLGA8TH3BQL2 631 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 F2RL2O00254 374 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CHUKO15111 745 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 KMOO15229 486 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 B4GAT1O43505 415 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 VEGFDO43915 354 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 BANF1O75531 89 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ITGA10O75578 1167 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 POP7O75817 140 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 ZNF189O75820 626 aaPredicted RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 KLHL18O94889 574 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SUN1O94901 812 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GAS8O95995 478 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GOT2P00505 430 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 AHSGP02765 367 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 POLBP06746 335 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GP1BAP07359 652 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 HGFP14210 728 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ITGB6P18564 788 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ITGALP20701 1170 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ACRV1P26436 265 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 NMBRP28336 390 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 FOXN2P32314 431 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CRHR1P34998 444 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms