RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 KIAA0895LQ68EN5 471 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 LIPIQ6XZB0 460 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ZNF574Q6ZN55 896 aaPredicted RBP16.6■□□□□ 0.25
PTPRC-206ENST00000413409 Q6ZVL8 140 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 FUNDC1Q8IVP5 155 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 CDYL2Q8N8U2 506 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 DLG3Q92796 817 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 CDRT15Q96T59 188 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 SLC12A9Q9BXP2 914 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 DPH1Q9BZG8 443 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ZIM2Q9NZV7 527 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 SUCOQ9UBS9 1254 aaKnown RBP16.6■□□□□ 0.25
PTPRC-206ENST00000413409 SUN2Q9UH99 717 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 CD84Q9UIB8 345 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
PTPRC-206ENST00000413409 LRRC42Q9Y546 428 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 PCDHGA7Q9Y5G6 932 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 GPR45Q9Y5Y3 372 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 NVLO15381 856 aaKnown RBP16.59■□□□□ 0.25
PTPRC-206ENST00000413409 SGTAO43765 313 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 CAPN1P07384 714 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 GP1BBP13224 206 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 ACP1P24666 158 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 ETV3P41162 512 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 MAPK9P45984 424 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 AP1S2P56377 157 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 FOXM1Q08050 763 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 CEACAM7Q14002 265 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 ELAVL3Q14576 367 aaKnown RBP16.59■□□□□ 0.25
PTPRC-206ENST00000413409 C6orf132Q5T0Z8 1188 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 FAM219BQ5XKK7 198 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 PAOXQ6QHF9 649 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 GALNT13Q8IUC8 556 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 PPFIBP2Q8ND30 876 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 OR4F6Q8NGB9 312 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 OR9I1Q8NGQ6 314 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 NAT14Q8WUY8 206 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 BTN2A2Q8WVV5 523 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 SCAMP4Q969E2 229 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 ESAMQ96AP7 390 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 DTD2Q96FN9 168 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 PPP1R16AQ96I34 528 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 COQ10AQ96MF6 247 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 NTMT1Q9BV86 223 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
PTPRC-206ENST00000413409 TRIM54Q9BYV2 358 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 TMEM245Q9H330 911 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 IPPKQ9H8X2 491 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 PARVBQ9HBI1 364 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 SGK2Q9HBY8 427 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 CROTQ9UKG9 612 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 ANGPTL3Q9Y5C1 460 aa16.59■□□□□ 0.25
PTPRC-206ENST00000413409 PABPN1LA6NDY0 278 aaKnown RBP16.58■□□□□ 0.24
PTPRC-206ENST00000413409 FADS2P1A8MWK0 482 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 NR5A2O00482 541 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 SPINT1O43278 529 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 KATNA1O75449 491 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 GUCA1CO95843 209 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 EBLN1P0CF75 366 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 ACADSP16219 412 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 CYP2A7P20853 494 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 HMOX2P30519 316 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 HNMTP50135 292 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 SESN3P58005 492 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 RPS6KA2Q15349 733 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 TAF11Q15544 211 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 C18orf21Q32NC0 220 aaPredicted RBP16.58■□□□□ 0.24
PTPRC-206ENST00000413409 SPATS1Q496A3 300 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 ATP6AP1LQ52LC2 224 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 C9orf64Q5T6V5 341 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 CDCP2Q5VXM1 449 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 ZFP1Q6P2D0 407 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 UBE2R2Q712K3 238 aaPredicted RBP16.58■□□□□ 0.24
PTPRC-206ENST00000413409 OR2T11Q8NH01 316 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 NRG4Q8WWG1 115 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 ASB11Q8WXH4 323 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 GLMNQ92990 594 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 GLYATL1Q969I3 302 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 ABCG8Q9H221 673 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 SPAG4Q9NPE6 437 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 PRSS16Q9NQE7 514 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 NMRK1Q9NWW6 199 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 PPM1HQ9ULR3 514 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 PDE10AQ9Y233 779 aa16.58■□□□□ 0.24
PTPRC-206ENST00000413409 DYTNA2CJ06 578 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 C10orf142B7Z368 130 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 GFYI3L273 518 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 KPNA3O00505 521 aaPredicted RBP16.57■□□□□ 0.24
PTPRC-206ENST00000413409 AREL1O15033 823 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 YKT6O15498 198 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 CFLARO15519 480 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 STK16O75716 305 aa16.57■□□□□ 0.24
PTPRC-206ENST00000413409 BCAS2O75934 225 aaPredicted RBP16.57■□□□□ 0.24
PTPRC-206ENST00000413409 SORBS2O94875 1100 aaKnown RBP16.57■□□□□ 0.24
PTPRC-206ENST00000413409 GSTM1P09488 218 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms