RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 FBXO10Q9UK96 956 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CCL26Q9Y258 94 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 THSD7BQ9C0I4 1608 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 WNT9AO14904 365 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CBSLP0DN79 551 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 KDELR2P33947 212 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CBSP35520 551 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 ETV3P41162 512 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
NUB1-201ENST00000413040 NPTX1Q15818 432 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 HKDC1Q2TB90 917 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 TTC29Q8NA56 475 aaPredicted RBP13.4□□□□□ -0.26
NUB1-201ENST00000413040 CYB5D2Q8WUJ1 264 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 FAM83DQ9H4H8 585 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 SCN3BQ9NY72 215 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 RAPGEFL1Q9UHV5 662 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 NINQ8N4C6 2090 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 E7EQ34 232 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CCL16O15467 120 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 FAM20BO75063 409 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CLPXO76031 633 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 FABP3P05413 133 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 TLE2Q04725 743 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 EMX1Q04741 257 aaPredicted RBP13.4□□□□□ -0.26
NUB1-201ENST00000413040 UGT8Q16880 541 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 VMACQ2NL98 169 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 ZNF691Q5VV52 312 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 HSH2DQ96JZ2 352 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 CAPNS2Q96L46 248 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 REEP1Q9H902 201 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 KRT84Q9NSB2 600 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 VPS29Q9UBQ0 182 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 TMPRSS11EQ9UL52 423 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 PNMA8BQ9ULN7 279 aaPredicted RBP13.4□□□□□ -0.26
NUB1-201ENST00000413040 BTBD3Q9Y2F9 522 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 AP3M1Q9Y2T2 418 aa13.4□□□□□ -0.26
NUB1-201ENST00000413040 PLXNA4Q9HCM2 1894 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 ZNF99A8MXY4 864 aaPredicted RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 MYO1DO94832 1006 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 PRPS1L1P21108 318 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 BDKRB1P46663 353 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 DAPP51397 102 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 DEFB103AP81534 67 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 DUOXA1Q1HG43 343 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 LRIF1Q5T3J3 769 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 C1orf52Q8N6N3 182 aaKnown RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 ABHD11Q8NFV4 315 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 TMEM159Q96B96 161 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 SGK2Q9HBY8 427 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 FAIMQ9NVQ4 179 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 ANAPC1Q9H1A4 1944 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 MGAT4DA6NG13 374 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 SAP18O00422 153 aaKnown RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 AXIN1O15169 862 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 LATS1O95835 1130 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 JUNBP17275 347 aaPredicted RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 OPRL1P41146 370 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 VBP1P61758 197 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 TOP3AQ13472 1001 aaPredicted RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 DOC2AQ14183 400 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 RFX4Q33E94 735 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 CYP27C1Q4G0S4 372 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 Q6ZNX1 250 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 AHSA2Q719I0 299 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 CALHM3Q86XJ0 350 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 FAM9CQ8IZT9 166 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 CHCHD4Q8N4Q1 142 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 OR52J3Q8NH60 311 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 RIOK2Q9BVS4 552 aaKnown RBP13.39□□□□□ -0.27
NUB1-201ENST00000413040 SLC46A2Q9BY10 475 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 TPT1P8Q9HAU6 139 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 USE1Q9NZ43 259 aa13.39□□□□□ -0.27
NUB1-201ENST00000413040 TGM5O43548 720 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 C8AP07357 584 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 GP2P55259 537 aaKnown RBP13.38□□□□□ -0.27
NUB1-201ENST00000413040 FPGSQ05932 587 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 EGFLAMQ63HQ2 1017 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 GTF2IRD2BQ6EKJ0 949 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 Q6ZPB1 254 aaPredicted RBP13.38□□□□□ -0.27
NUB1-201ENST00000413040 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 GTF2IRD2Q86UP8 949 aa13.38□□□□□ -0.27
NUB1-201ENST00000413040 THOC6Q86W42 341 aaKnown RBP13.38□□□□□ -0.27
NUB1-201ENST00000413040 SETD9Q8NE22 299 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms