RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 H0YGG7 62 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 MKRN2OSH3BPM6 223 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 HAT1O14929 419 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 ZBTB14O43829 449 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 ARSFP54793 590 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 ARF3P61204 181 aaPredicted RBP18.21■□□□□ 0.51
SF3A1-202ENST00000411423 GRM7Q14831 915 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 PRTGQ2VWP7 1150 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 TCTE1Q5JU00 501 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 DUPD1Q68J44 220 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 TCTN3Q6NUS6 607 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 MRGPREQ86SM8 312 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 PLD3Q8IV08 490 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 ARHGEF39Q8N4T4 335 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 OR2Y1Q8NGV0 311 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 OR2A5Q96R48 311 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 ERP44Q9BS26 406 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 MLXIPLQ9NP71 852 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 GPN3Q9UHW5 284 aaPredicted RBP18.21■□□□□ 0.51
SF3A1-202ENST00000411423 MAU2Q9Y6X3 613 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 PCM1Q15154 2024 aa18.21■□□□□ 0.51
SF3A1-202ENST00000411423 HYKKA2RU49 373 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 FAM187AA6NFU0 413 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 P2RX6O15547 441 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 SRPX2O60687 465 aaPredicted RBP18.2■□□□□ 0.5
SF3A1-202ENST00000411423 CEACAM4O75871 244 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 EIF2S1P05198 315 aaKnown RBP18.2■□□□□ 0.5
SF3A1-202ENST00000411423 HSD17B2P37059 387 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 TBPL1P62380 186 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 MGAT5Q09328 741 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 ZNF460Q14592 562 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 HKDC1Q2TB90 917 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 UGT3A1Q6NUS8 523 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 ATG14Q6ZNE5 492 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 CAPN12Q6ZSI9 719 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 OVCH1Q7RTY7 1134 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 PPP1R32Q7Z5V6 425 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 ZBED8Q8IZ13 594 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 SHISA5Q8N114 240 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 TTC29Q8NA56 475 aaPredicted RBP18.2■□□□□ 0.5
SF3A1-202ENST00000411423 SPSB2Q99619 263 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 MESP1Q9BRJ9 268 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 MCMBPQ9BTE3 642 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 ACSS2Q9NR19 701 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 ANKMY1Q9P2S6 941 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 CTSFQ9UBX1 484 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 VWA7Q9Y334 891 aa18.2■□□□□ 0.5
SF3A1-202ENST00000411423 HEATR5BQ9P2D3 2071 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 CXorf49A8MYA2 514 aaPredicted RBP18.19■□□□□ 0.5
SF3A1-202ENST00000411423 STATHP02808 62 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 FOLR3P41439 243 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 TLE1Q04724 770 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 SSPNQ14714 243 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 NKG7Q16617 165 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 FAM45BPQ6NSW5 357 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 SHISA6Q6ZSJ9 500 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 ASB18Q6ZVZ8 466 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 ZC3HC1Q86WB0 502 aaKnown RBP18.19■□□□□ 0.5
SF3A1-202ENST00000411423 MYO1HQ8N1T3 1032 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 FDCSPQ8NFU4 85 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 FAM45AQ8TCE6 357 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 NUDT9Q9BW91 350 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 ATG10Q9H0Y0 220 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 RUVBL1Q9Y265 456 aaKnown RBP18.19■□□□□ 0.5
SF3A1-202ENST00000411423 PADI2Q9Y2J8 665 aa18.19■□□□□ 0.5
SF3A1-202ENST00000411423 A6NL46 340 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 ZNF839A8K0R7 811 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 H7BY64 318 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 C1QAP02745 245 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 C8GP07360 202 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 SSTR1P30872 391 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 RGS4P49798 205 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 PDAP1Q13442 181 aaKnown RBP18.18■□□□□ 0.5
SF3A1-202ENST00000411423 YOD1Q5VVQ6 348 aaPredicted RBP18.18■□□□□ 0.5
SF3A1-202ENST00000411423 AGTRAPQ6RW13 159 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 STRA8Q7Z7C7 330 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 FKBP10Q96AY3 582 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 CCDC138Q96M89 665 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 PRAP1Q96NZ9 151 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 C17orf62Q9BQA9 187 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 SLC25A23Q9BV35 468 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 SLC26A1Q9H2B4 701 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 SOX17Q9H6I2 414 aaPredicted RBP18.18■□□□□ 0.5
SF3A1-202ENST00000411423 PARVBQ9HBI1 364 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 WHRNQ9P202 907 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 ZFATQ9P243 1243 aa18.18■□□□□ 0.5
SF3A1-202ENST00000411423 CORO1CQ9ULV4 474 aaPredicted RBP18.18■□□□□ 0.5
SF3A1-202ENST00000411423 MDC1Q14676 2089 aaKnown RBP18.18■□□□□ 0.5
SF3A1-202ENST00000411423 VSTM2BA6NLU5 285 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 FFAR3O14843 346 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 SLC16A5O15375 505 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 GPR42O15529 346 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 ALOX12BO75342 701 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 CASRP41180 1078 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 GPX6P59796 221 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 ABATP80404 500 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 SP140Q13342 867 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 RAPSNQ13702 412 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 THEMIS2Q5TEJ8 643 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 PRAMEF13Q5VWM6 474 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms