RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 C1orf127Q8N9H9 656 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 TSEN2Q8NCE0 465 aaKnown RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 COL21A1Q96P44 957 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 TRAPPC9Q96Q05 1148 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 P2RY13Q9BPV8 354 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ACBD6Q9BR61 282 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 COL20A1Q9P218 1284 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 C19orf25Q9UFG5 118 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 YIPF1Q9Y548 306 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PXDNQ92626 1479 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 EDDM13A0A1B0GTR0 161 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PIP5K1BO14986 540 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 FMO3P31513 532 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ADRM1Q16186 407 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.11e-6■■■□□ 18.3
SCN9A-203ENST00000409672 FAM180BQ6P0A1 224 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PAOXQ6QHF9 649 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 BBS12Q6ZW61 710 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 MON1BQ7L1V2 547 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 HSPBAP1Q96EW2 488 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ZBTB20Q9HC78 741 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 A0A1B0GV50 99 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FAM240BA0A1B0GVZ2 78 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 UPK3BL1B0FP48 263 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 UPK3BL2E5RIL1 263 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HCRTR2O43614 444 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 NSG1P42857 185 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HMGCS1Q01581 520 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PPP1R8Q12972 351 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HPS1Q92902 700 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 BARD1Q99728 777 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 AIFM2Q9BRQ8 373 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SPARCP09486 303 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 RPS9P46781 194 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CDK10Q15131 360 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FAM71AQ8IYT1 594 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZC3HAV1LQ96H79 300 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM121BQ9BXQ6 578 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 KCNMB3Q9NPA1 279 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 MYO5BQ9ULV0 1848 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 MEN1O00255 615 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 NARSO43776 548 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CNTN5O94779 1100 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CD79AP11912 226 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SLC1A2P43004 574 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DEFB110Q30KQ9 67 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 C5orf22Q49AR2 442 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 KCTD9Q7L273 389 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CPSF7Q8N684 471 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SNX27Q96L92 541 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 GPATCH1Q9BRR8 931 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CPEB1Q9BZB8 566 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HPF1Q9NWY4 346 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 RHCGQ9UBD6 479 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HMGXB4Q9UGU5 601 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SNX7Q9UNH6 387 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 A0A087WXM4 84 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CHST10O43529 356 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 MATN1P21941 496 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CDKL4Q5MAI5 379 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 THOC7Q6I9Y2 204 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SLCO6A1Q86UG4 719 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM185BQ9H7F4 350 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 LEFTY2O00292 366 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 KRT36O76013 467 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PRAMEF12O95522 483 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CDK9P50750 372 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 C3orf38Q5JPI3 329 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 LRRC66Q68CR7 880 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SPATA19Q7Z5L4 167 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CAMKVQ8NCB2 501 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 KCTD13Q8WZ19 329 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PTCHD1Q96NR3 888 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DNAJB11Q9UBS4 358 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 STXBP5LQ9Y2K9 1186 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 A0A0G2JLL6 359 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PDCD5O14737 125 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 GNRHRP30968 328 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEA12P43365 314 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PRRT2Q7Z6L0 340 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 HNRNPLLQ8WVV9 542 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZDHHC12Q96GR4 267 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FBXL18Q96ME1 805 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FGFBP2Q9BYJ0 223 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZCCHC3Q9NUD5 404 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 GRHPRQ9UBQ7 328 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 A0A1W2PRB8 838 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 AURKAO14965 403 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 STK19P49842 368 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DECR1Q16698 335 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 GPR153Q6NV75 609 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 BRI3BPQ8WY22 251 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SMARCD2Q92925 531 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FUT8Q9BYC5 575 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms