RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MKRN2Q9H000 416 aaKnown RBP6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 PCBD2Q9H0N5 130 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 ALG2Q9H553 416 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 SGK2Q9HBY8 427 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 PREBQ9HCU5 417 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 ARMC1Q9NVT9 282 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 SPATA6Q9NWH7 488 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 FZD4Q9ULV1 537 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 RUVBL1Q9Y265 456 aaKnown RBP6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 TRANK1O15050 2925 aa6.07□□□□□ -1.44
GTF3C3-202ENST00000409364 LAMA3Q16787 3333 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ZNF106Q9H2Y7 1883 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 A0A1W2PQU0 124 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 E7EQ34 232 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 HNRNPRO43390 633 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 GMNNO75496 209 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 KLF8O95600 359 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 HOXC4P09017 264 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 MYCLP1P12525 358 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 HOXB2P14652 356 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CD22P20273 847 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 GSK3BP49841 420 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 HNRNPFP52597 415 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ATXN3P54252 364 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ACSM2AQ08AH3 577 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 DMPKQ09013 629 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ADGRE1Q14246 886 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 FBXO43Q4G163 708 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 TMEM259Q4ZIN3 620 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 RABL3Q5HYI8 236 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 C6orf10Q5SRN2 563 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 OGFRL1Q5TC84 451 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ACSM2BQ68CK6 577 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 LCN8Q6JVE9 175 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 KIAA1211LQ6NV74 962 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 DOK6Q6PKX4 331 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 IZUMO2Q6UXV1 221 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CYP2R1Q6VVX0 501 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 HORMAD1Q86X24 394 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 PDSS2Q86YH6 399 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 DCUN1D3Q8IWE4 304 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 KIAA2013Q8IYS2 634 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 TBC1D21Q8IYX1 336 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SLC44A3Q8N4M1 653 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 RAB42Q8N4Z0 105 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 TP53I13Q8NBR0 393 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ICA1LQ8NDH6 482 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 OR7G3Q8NG95 312 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 EZH1Q92800 747 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 DNASE1L2Q92874 299 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 FOXJ1Q92949 421 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 NEIL2Q969S2 332 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SIPA1Q96FS4 1042 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 APIPQ96GX9 242 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ITCHQ96J02 903 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 APOLD1Q96LR9 279 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 BTBD9Q96Q07 612 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 UHRF1Q96T88 793 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 MTERF1Q99551 399 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 PRPF18Q99633 342 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 LGR4Q9BXB1 951 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 KCNH6Q9H252 994 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 VCXQ9H320 206 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 COPS7BQ9H9Q2 264 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CCDC177Q9NQR7 707 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 MBNL1Q9NR56 388 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CCM2LQ9NUG4 571 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SLAMF8Q9P0V8 285 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SLC23A2Q9UGH3 650 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SERGEFQ9UGK8 458 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ADGRE2Q9UHX3 823 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CD207Q9UJ71 328 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 CNOT11Q9UKZ1 510 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 ZFR2Q9UPR6 939 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 DLGAP4Q9Y2H0 992 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 TSC22D4Q9Y3Q8 395 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 PCDHB3Q9Y5E6 796 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SNX13Q9Y5W8 968 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 MTCH2Q9Y6C9 303 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 SCN8AQ9UQD0 1980 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 MYO9BQ13459 2157 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 GBF1Q92538 1859 aa6.06□□□□□ -1.44
GTF3C3-202ENST00000409364 PIKFYVEQ9Y2I7 2098 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 A0A096LPI6 279 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 A0A1W2PQF6 199 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 DHRS12A0PJE2 317 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 KRT87PA6NCN2 255 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 H0YJX3 145 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 RNGTTO60942 597 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 EGFP01133 1207 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 GPIP06744 558 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 SLC35G4P0C7Q5 338 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 ACADMP11310 421 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 SDC1P18827 310 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 CXCR2P25025 360 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 PSMA4P25789 261 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 GRIA3P42263 894 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 PIK3CBP42338 1070 aa6.05□□□□□ -1.44
GTF3C3-202ENST00000409364 ASMTP46597 345 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms