RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 ANKS3Q6ZW76 656 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 STAG3L4Q8TBR4 150 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 MAP6Q96JE9 813 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 PSD2Q9BQI7 771 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
PTPRN-202ENST00000409251 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-202ENST00000409251 RABL2AQ9UBK7 228 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-202ENST00000409251 ABCG2Q9UNQ0 655 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 M0QX08 132 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 OR1I1O60431 355 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 SOX6P35712 828 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 HSPA7P48741 367 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 EEFSECP57772 596 aaKnown RBP12.61□□□□□ -0.39
PTPRN-202ENST00000409251 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 AMIGO1Q86WK6 493 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 SETD9Q8NE22 299 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 OR8H1Q8NGG4 311 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 IGSF21Q96ID5 467 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-202ENST00000409251 TSPAN18Q96SJ8 248 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
PTPRN-202ENST00000409251 UPK1AO00322 258 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 PSIP1O75475 530 aaKnown RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CD1DP15813 335 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 RCAN2Q14206 197 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ZNF267Q14586 743 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 GPSM1Q86YR5 675 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 LINGO1Q96FE5 620 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ATP13A1Q9HD20 1204 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 VNN3Q9NY84 501 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 FBXO9Q9UK97 447 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 K7ERQ8 282 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 SYN3O14994 580 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 AKR7A2O43488 359 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 APOL3O95236 402 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CKMT1AP12532 417 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TACR2P21452 398 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CA5AP35218 305 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 RGRP47804 291 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 PSMD8P48556 350 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 KCNC4Q03721 635 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 SCAPQ12770 1279 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 PON2Q15165 354 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CLPPQ16740 277 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 GLCCI1Q86VQ1 547 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 SLC13A3Q8WWT9 602 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TLR6Q9Y2C9 796 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 SPEGQ15772 3267 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 MATN3O15232 486 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 NUPL2O15504 423 aaKnown RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 CTPS1P17812 591 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TOP3AQ13472 1001 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 PTCHD3Q3KNS1 767 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 HACD2Q6Y1H2 254 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 LIX1Q8N485 282 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 AIG1Q9NVV5 245 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TRPM5Q9NZQ8 1165 aa12.6□□□□□ -0.39
PTPRN-202ENST00000409251 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
PTPRN-202ENST00000409251 A0A1W2PRU2 124 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 CCDC182A6NF36 153 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 TULP3O75386 442 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 CREG1O75629 220 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 C1QCP02747 245 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 URODP06132 367 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 JUNBP17275 347 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-202ENST00000409251 GABRR2P28476 465 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-202ENST00000409251 BRMS1LQ5PSV4 323 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-202ENST00000409251 DNAJB7Q7Z6W7 309 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-202ENST00000409251 OR56A4Q8NGH8 313 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 ENKURQ8TC29 256 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 BPIFB1Q8TDL5 484 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 GTPBP3Q969Y2 492 aaKnown RBP12.59□□□□□ -0.39
PTPRN-202ENST00000409251 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 ITPAQ9BY32 194 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 UCK2Q9BZX2 261 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 HCFC1R1Q9NWW0 138 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 TAS2R13Q9NYV9 303 aa12.59□□□□□ -0.39
PTPRN-202ENST00000409251 ARID1BQ8NFD5 2236 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms