RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CUL1Q13616 776 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 NKG7Q16617 165 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 HIF1AQ16665 826 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 BBS9Q3SYG4 887 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 TUBB8Q3ZCM7 444 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CCSMST1Q4G0I0 132 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CPNE9Q8IYJ1 553 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CSNK1A1LQ8N752 337 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 GPATCH11Q8N954 259 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 GALNT11Q8NCW6 608 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CPT1CQ8TCG5 803 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 ZNF480Q8WV37 535 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 ATL1Q8WXF7 558 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 MIB2Q96AX9 1013 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 MIEF2Q96C03 454 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CERS2Q96G23 380 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 SNF8Q96H20 258 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CAPZA3Q96KX2 299 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CCDC138Q96M89 665 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 PKP4Q99569 1192 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 CRB3Q9BUF7 120 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 ACAT2Q9BWD1 397 aa8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 PPANQ9NQ55 473 aaKnown RBP8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 ZC3H7BQ9UGR2 993 aaKnown RBP8.68□□□□□ -1.02
SNORD88A-201ENST00000408314 A6NL46 340 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 E7ENX8 843 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 SORBS2O94875 1100 aaKnown RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 HAUS5O94927 633 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 UMODP07911 640 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 CYC1P08574 325 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ENO2P09104 434 aaPredicted RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ACPPP15309 386 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 CXCR2P25025 360 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 MCM3P25205 808 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ITGA3P26006 1051 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 AVPR1BP47901 424 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 IL2P60568 153 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 RPS15AP62244 130 aaKnown RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 MPP1Q00013 466 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 TAP2Q03519 686 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 DSG2Q14126 1118 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 FASTKQ14296 549 aaKnown RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 FRG1Q14331 258 aaKnown RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 PRTGQ2VWP7 1150 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 PRAMEF13Q5VWM6 474 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ZNF425Q6IV72 752 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM45BPQ6NSW5 357 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 NIPAL1Q6NVV3 410 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 JMJD6Q6NYC1 403 aaPredicted RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ZNF549Q6P9A3 640 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 SUSD1Q6UWL2 747 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 PPP1R32Q7Z5V6 425 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 PAQR7Q86WK9 346 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 KLHL7Q8IXQ5 586 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 IQCKQ8N0W5 287 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ZADH2Q8N4Q0 377 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 GIMAP7Q8NHV1 300 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM45AQ8TCE6 357 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 SPSB2Q99619 263 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 HAUS8Q9BT25 410 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 NUDT9Q9BW91 350 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 DRC3Q9H069 523 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ILKAPQ9H0C8 392 aaPredicted RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 KCNF1Q9H3M0 494 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 EPS8L2Q9H6S3 715 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 PARVBQ9HBI1 364 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC6A20Q9NP91 592 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 MKKSQ9NPJ1 570 aaPredicted RBP8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 TMEM184CQ9NVA4 438 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 ZFATQ9P243 1243 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 FBXL4Q9UKA2 621 aa8.67□□□□□ -1.02
SNORD88A-201ENST00000408314 RP1L1Q8IWN7 2480 aaPredicted RBP8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 PCM1Q15154 2024 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 VSTM2BA6NLU5 285 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 EFCAB8A8MWE9 144 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 H0YGG7 62 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 K7EM74 188 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 HPP00738 406 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 PDGFAP04085 211 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CTSBP07858 339 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 IMPA1P29218 277 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 ARF3P61204 181 aaPredicted RBP8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 TBPL1P62380 186 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CALCOCO2Q13137 446 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM53BQ14153 422 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM69BQ5VUD6 431 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 AGAP7PQ5VUJ5 663 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC6A19Q695T7 634 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 FRMPD2BQ6IN97 320 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CAPN13Q6MZZ7 669 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms