RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 KLHL25Q9H0H3 589 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 SRMSQ9H3Y6 488 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 GSTO2Q9H4Y5 243 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 NOL11Q9H8H0 719 aaKnown RBP8.06□□□□□ -1.12
GPC3-203ENST00000406757 MANSC1Q9H8J5 431 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 ZBTB26Q9HCK0 441 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 POT1Q9NUX5 634 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 OGFRQ9NZT2 677 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 MID2Q9UJV3 735 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 PCTPQ9UKL6 214 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 CLCA2Q9UQC9 943 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 FIS1Q9Y3D6 152 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 ANGPTL3Q9Y5C1 460 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 U3KQA8 63 aa8.06□□□□□ -1.12
GPC3-203ENST00000406757 CABIN1Q9Y6J0 2220 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 A0A1W2PPV9 198 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 GSAPA4D1B5 854 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 TCP11X1B4DZS4 312 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 STX16-NPEPL1H3BU86 382 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 E2F3O00716 465 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 UBFD1O14562 309 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 OR7A17O14581 309 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 STX16O14662 325 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 B4GAT1O43505 415 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PRAMEF10O60809 474 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PRAMEF4O60810 478 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 RPS17P08708 135 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 CHRM5P08912 532 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 AMD1P17707 334 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 EPORP19235 508 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ACP1P24666 158 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 NDUFS1P28331 727 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ARL1P40616 181 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 SLC1A6P48664 564 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PIK3CGP48736 1102 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 RAB28P51157 221 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 DNAJB13P59910 316 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ABCE1P61221 599 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 HERVK_113P63132 956 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 GNGT1P63211 74 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 DAB2P98082 770 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 NFKB2Q00653 900 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 MEF2AQ02078 507 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 CLCQ05315 142 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ILKQ13418 452 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 GTF2H2Q13888 395 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PCBP2Q15366 365 aaKnown RBP eCLIP8.05□□□□□ -1.125e-7■■■■□ 21.9
GPC3-203ENST00000406757 PDK4Q16654 411 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 CYP2A13Q16696 494 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ARL13AQ5H913 290 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 CATSPEREQ5SY80 951 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PRAMEF9Q5VWM5 478 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 CAPN13Q6MZZ7 669 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 ZCCHC8Q6NZY4 707 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 GTF2H2CQ6P1K8 395 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 FAM47EQ6ZV65 393 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 USP53Q70EK8 1073 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 EFL1Q7Z2Z2 1120 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 TCAIMQ8N3R3 496 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 OR52B6Q8NGF0 335 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 OR6Y1Q8NGX8 325 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 OR2L8Q8NGY9 312 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 OR56A3Q8NH54 315 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 LRRC8CQ8TDW0 803 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ZNF483Q8TF39 744 aaPredicted RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 UBTD2Q8WUN7 234 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ATL1Q8WXF7 558 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 SMPDL3AQ92484 453 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 NCSTNQ92542 709 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 FGF11Q92914 225 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ATP6V1E2Q96A05 226 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 L3HYPDHQ96EM0 354 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 NAF1Q96HR8 494 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 MAGEB18Q96M61 343 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 MIPEPQ99797 713 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 DUSP23Q9BVJ7 150 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 ERVK-6Q9BXR3 956 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 STN1Q9H668 368 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 SYNDIG1Q9H7V2 258 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 IPPKQ9H8X2 491 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 TNFRSF12AQ9NP84 129 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 SLCO1B3Q9NPD5 702 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 DNAJC11Q9NVH1 559 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 PNPOQ9NVS9 261 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 HRASLS2Q9NWW9 162 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 KCNK4Q9NYG8 393 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 SPATA7Q9P0W8 599 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 OPTCQ9UBM4 332 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 KLHL3Q9UH77 587 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 TAC3Q9UHF0 121 aa8.05□□□□□ -1.12
GPC3-203ENST00000406757 GOLGA4Q13439 2230 aaKnown RBP8.05□□□□□ -1.12
GPC3-203ENST00000406757 ATMQ13315 3056 aa8.04□□□□□ -1.12
GPC3-203ENST00000406757 CCDC189A1A4V9 331 aa8.04□□□□□ -1.12
GPC3-203ENST00000406757 PIPSLA2A3N6 862 aa8.04□□□□□ -1.12
GPC3-203ENST00000406757 TMEM233B4DJY2 109 aa8.04□□□□□ -1.12
GPC3-203ENST00000406757 E7EQ34 232 aa8.04□□□□□ -1.12
GPC3-203ENST00000406757 RNF223E7ERA6 249 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms