RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 HHEXQ03014 270 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KLF10Q13118 480 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 TEAD4Q15561 434 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HIST2H2ACQ16777 129 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 RFTN2Q52LD8 501 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 AGKQ53H12 422 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 XKR7Q5GH72 579 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PAGE2BQ5JRK9 111 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PMS2CLQ68D20 193 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HIST2H2AA3Q6FI13 130 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 MED27Q6P2C8 311 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PAOXQ6QHF9 649 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NXPE4Q6UWF7 544 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 WDR5BQ86VZ2 330 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 GKN2Q86XP6 184 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 OR7G3Q8NG95 312 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HUS1BQ8NHY5 278 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SETD7Q8WTS6 366 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 GAB3Q8WWW8 586 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KLHL29Q96CT2 875 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PTCD3Q96EY7 689 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCT7Q99832 543 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 RAB11FIP5Q9BXF6 653 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ACPTQ9BZG2 426 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC40A1Q9NP59 571 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 WDR70Q9NW82 654 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 UCKL1Q9NWZ5 548 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 GPRC5BQ9NZH0 403 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SPASTQ9UBP0 616 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PCDHGA11Q9Y5H2 935 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SNX11Q9Y5W9 270 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FANCMQ8IYD8 2048 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KIR2DS5A0A0G2JLQ3 304 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 A0A0G2JNG1 304 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 A0A1W2PPV9 198 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 MAGEB17A8MXT2 336 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 B2RBV5 119 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 KIR2DS3K7RE56 304 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 SLC28A1O00337 649 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 SAP18O00422 153 aaKnown RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 BTN3A3O00478 584 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 LSM1O15116 133 aaKnown RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 AQP9O43315 295 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 NRP2O60462 931 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 UGDHO60701 494 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 STATHP02808 62 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ERGP11308 486 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 TDGF1P13385 188 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 TYRP1P17643 537 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 POLR2CP19387 275 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 CALB2P22676 271 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 SHMT2P34897 504 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 CCR8P51685 355 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 NCALDP61601 193 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 COL9A2Q14055 689 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 KIR2DS5Q14953 304 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 KRT72Q14CN4 511 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 PLK5Q496M5 336 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 GGTA1PQ4G0N0 100 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 IL23RQ5VWK5 629 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ICE2Q659A1 982 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ATG9BQ674R7 924 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 GRHL2Q6ISB3 625 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 LCTLQ6UWM7 567 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 TMIGD1Q6UXZ0 262 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 RIPOR1Q6ZS17 1223 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 SNX32Q86XE0 403 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ZNF548Q8NEK5 533 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 GPR156Q8NFN8 814 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 OR2L8Q8NGY9 312 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 USP7Q93009 1102 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 CMTM5Q96DZ9 223 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 EFCAB11Q9BUY7 163 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 KLHL25Q9H0H3 589 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 PCBD2Q9H0N5 130 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 LRTM1Q9HBL6 345 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 MRPS30Q9NP92 439 aaKnown RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.57□□□□□ -1.842e-17■■□□□ 11.9
RTN4-208ENST00000404909 OR6C2Q9NZP2 312 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 BAIAP2L1Q9UHR4 511 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 TAGLN3Q9UI15 199 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 POLR3HQ9Y535 204 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 PCDHB11Q9Y5F2 797 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ARID1BQ8NFD5 2236 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 A0A1B0GTW7 788 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 FAM86C2PA6NEL3 165 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 OR5K4A6NMS3 321 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 AIM2O14862 343 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 OR1F1O43749 312 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 TGFB1P01137 390 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 ANXA6P08133 673 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 CHRM5P08912 532 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 G6PDP11413 515 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 COX4I1P13073 169 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 IDO1P14902 403 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 HOXD11P31277 338 aaPredicted RBP3.57□□□□□ -1.84
RTN4-208ENST00000404909 GRIA3P42263 894 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 RASSF2P50749 326 aa3.57□□□□□ -1.84
RTN4-208ENST00000404909 RPS13P62277 151 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms