RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 NECAB1Q8N987 351 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 TC2NQ8N9U0 490 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 GMCL1P1Q8NEA9 526 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 OR10S1Q8NGN2 331 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 DAZLQ92904 295 aaKnown RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 NXNL1Q96CM4 212 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 LMLNQ96KR4 655 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 LINC00615Q96LM1 132 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 FNDC11Q9BVV2 318 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 ABCF3Q9NUQ8 709 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 OLAHQ9NV23 265 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 DONSONQ9NYP3 566 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 PTTG2Q9NZH5 202 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 C5AR2Q9P296 337 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CLIP2Q9UDT6 1046 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 SMC3Q9UQE7 1217 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 SPIN1Q9Y657 262 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 DOCK3Q8IZD9 2030 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 A0A0G2JMZ2 1700 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 TRBC2A0A5B9 178 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 FEZF1A0PJY2 475 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 C19orf81C9J6K1 198 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 F5H6K3 240 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 C16orf97H3BN30 126 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 XPNPEP2O43895 674 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 GPR137BO60478 399 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 DEXIO95424 95 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CTDNEP1O95476 244 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ACP2P11117 423 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CPT2P23786 658 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 MC5RP33032 325 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CCR3P51677 355 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 BACE1P56817 501 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 HNRNPKP61978 463 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 NUCB2P80303 420 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CDK3Q00526 305 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 KLRC3Q07444 240 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 PNRC1Q12796 327 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ALCAMQ13740 583 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 RNASEH2BQ5TBB1 312 aaKnown RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 FAM109BQ6ICB4 259 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 KLC3Q6P597 504 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 FOXL2NBQ6ZUU3 175 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 C9orf139Q6ZV77 190 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 LONP2Q86WA8 852 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ERO1BQ86YB8 467 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 FAM114A1Q8IWE2 563 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 MAB21L3Q8N8X9 362 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 TDRD5Q8NAT2 981 aaKnown RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 OR13A1Q8NGR1 328 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 SPACA9Q96E40 222 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 C12orf42Q96LP6 360 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF583Q96ND8 569 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CTAGE1Q96RT6 745 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ABHD6Q9BV23 337 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 SPZ1Q9BXG8 430 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 GPR88Q9GZN0 384 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 VCPKMTQ9H867 229 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF556Q9HAH1 456 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CCDC177Q9NQR7 707 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 CHMP5Q9NZZ3 219 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 MAD2L2Q9UI95 211 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF580Q9UK33 172 aa4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 NAP1L2Q9ULW6 460 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P19-201ENST00000403971 KIAA1217Q5T5P2 1943 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 A0A1W2PS18 150 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ANKUB1A6NFN9 424 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 C15orf62A8K5M9 175 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CXCL11O14625 94 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CAPN9O14815 690 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 WDR46O15213 610 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CTSVO60911 334 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 SLCO2B1O94956 709 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 BAG4O95429 457 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 TRUB2O95900 331 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 NDUFB10O96000 172 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 FDPSP14324 419 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CSF2RAP15509 400 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CKMT2P17540 419 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 NR1D1P20393 614 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 SYT1P21579 422 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 GJB2P29033 226 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 SLC1A4P43007 532 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 MLLT10P55197 1068 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 AKAP17AQ02040 695 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 PPIL2Q13356 520 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 VGLL4Q14135 290 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 SHROOM1Q2M3G4 852 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF628Q5EBL2 1059 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 FAM76BQ5HYJ3 339 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 PACS1Q6VY07 963 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 EXOC3L1Q86VI1 746 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF713Q8N859 430 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 FAM184AQ8NB25 1140 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 OR6J1Q8NGC5 347 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ACER1Q8TDN7 264 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 CHURC1Q8WUH1 139 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ABHD8Q96I13 439 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms