RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ALG14Q96F25 216 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 Q96MT0 163 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 ZNF300Q96RE9 604 aaPredicted RBP13.72□□□□□ -0.21
ATG3-202ENST00000402314 CWH43Q9H720 699 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 SLC6A13Q9NSD5 602 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 ANGPTL3Q9Y5C1 460 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 ORC6Q9Y5N6 252 aa13.72□□□□□ -0.21
ATG3-202ENST00000402314 PDZK1P1A8MUH7 402 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
ATG3-202ENST00000402314 DYRK3O43781 588 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 COL6A1P12109 1028 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 IGFBP5P24593 272 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 ARPC4P59998 168 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 NFATC2Q13469 925 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 IRAK1BP1Q5VVH5 260 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 CEP68Q76N32 757 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 EID3Q8N140 333 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 RBM4BQ9BQ04 359 aaKnown RBP13.71□□□□□ -0.21
ATG3-202ENST00000402314 KCNS3Q9BQ31 491 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 RBM4Q9BWF3 364 aaKnown RBP13.71□□□□□ -0.21
ATG3-202ENST00000402314 WWOXQ9NZC7 414 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 HACD3Q9P035 362 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 C3orf18Q9UK00 162 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
ATG3-202ENST00000402314 CD70P32970 193 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 ARHGEF7Q14155 803 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.22
ATG3-202ENST00000402314 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 ZNF691Q5VV52 312 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 LYPD8Q6UX82 237 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.71□□□□□ -0.22
ATG3-202ENST00000402314 RNF175Q8N4F7 328 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 NETO1Q8TDF5 533 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.22
ATG3-202ENST00000402314 SKA2Q8WVK7 121 aaPredicted RBP13.71□□□□□ -0.22
ATG3-202ENST00000402314 NUDT4Q9NZJ9 180 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 OPTCQ9UBM4 332 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 CRLS1Q9UJA2 301 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 TESMINQ9Y4I5 508 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 GMPPBQ9Y5P6 360 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 GBF1Q92538 1859 aa13.71□□□□□ -0.22
ATG3-202ENST00000402314 LOC730098B7Z3J9 87 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 M0R129 80 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 ANKRD28O15084 1053 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 GREM1O60565 184 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 MTX2O75431 263 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 GGT1P19440 569 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 GADD45AP24522 165 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 CRISP3P54108 245 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 OR8H2Q8N162 312 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 ELMOD1Q8N336 334 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 NEDD4LQ96PU5 975 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 CD84Q9UIB8 345 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 NEUROG3Q9Y4Z2 214 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 NPIPB15A6NHN6 443 aaPredicted RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 H7C0S8 307 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 AIREO43918 545 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 VIPP01282 170 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 CKMP06732 381 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 CHRNB1P11230 501 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 ZNF7P17097 686 aaPredicted RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 DGKEP52429 567 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 NECAB2Q7Z6G3 386 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 ADAMTSL2Q86TH1 951 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.7□□□□□ -0.22
ATG3-202ENST00000402314 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 PIK3C3Q8NEB9 887 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 CHCHD6Q9BRQ6 235 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 FBXO8Q9NRD0 319 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
ATG3-202ENST00000402314 PLXNA4Q9HCM2 1894 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 CXCR6O00574 342 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 ABLIM3O94929 683 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 ALDH1A1P00352 501 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 PSMA3P25788 255 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 GBX1Q14549 363 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 TAB1Q15750 504 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 ZNF404Q494X3 552 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 SUSD1Q6UWL2 747 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 PARP16Q8N5Y8 322 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 ISG20Q96AZ6 181 aaKnown RBP13.69□□□□□ -0.22
ATG3-202ENST00000402314 TXNDC15Q96J42 360 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 TMEM246Q9BRR3 403 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
ATG3-202ENST00000402314 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms