RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 A0A1W2PPV9 198 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 PIPSLA2A3N6 862 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 FXYD1O00168 92 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 HSD3B1P14060 373 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 HSD3B2P26439 372 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 AK4P27144 223 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-205ENST00000401607 CTBSQ01459 385 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 PAGE3Q5JUK9 113 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 LAS2Q8IYD9 372 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 SLC22A18ASQ8N1D0 253 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 FAM160A2Q8N612 972 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-205ENST00000401607 LINC01555Q8NAE3 123 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 CCL4L1Q8NHW4 92 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 GPATCH1Q9BRR8 931 aaKnown RBP24.73■■□□□ 1.55
CPNE1-205ENST00000401607 TBC1D29Q9UFV1 150 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 DMTF1Q9Y222 760 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 LRP4O75096 1905 aa24.73■■□□□ 1.55
CPNE1-205ENST00000401607 IGHV1OR15-9A0A0B4J2B8 117 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ZNF839A8K0R7 811 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 MAGEB17A8MXT2 336 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 TOR1BO14657 336 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 KRT36O76013 467 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ETHE1O95571 254 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 EML2O95834 649 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 PCNAP12004 261 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 CDH1P12830 882 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 SRP54P61011 504 aaKnown RBP24.72■■□□□ 1.55
CPNE1-205ENST00000401607 YBX1P67809 324 aaKnown RBP24.72■■□□□ 1.55
CPNE1-205ENST00000401607 SMPDL3AQ92484 453 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 APOLD1Q96LR9 279 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ACAT2Q9BWD1 397 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 VPS29Q9UBQ0 182 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 TAC3Q9UHF0 121 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 LEF1Q9UJU2 399 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-205ENST00000401607 TMED5Q9Y3A6 229 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 PRAMEF33A0A0G2JMD5 474 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ZNF217O75362 1048 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 MTHFD1P11586 935 aaKnown RBP24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ACPPP15309 386 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 RABIFP47224 123 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 TCEA2Q15560 299 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 PAGE2BQ5JRK9 111 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ABRAXAS1Q6UWZ7 409 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 RNF148Q8N7C7 305 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ENDOVQ8N8Q3 282 aaKnown RBP24.72■■□□□ 1.55
CPNE1-205ENST00000401607 NELL2Q99435 816 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ORAI3Q9BRQ5 295 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 TMEM168Q9H0V1 697 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 MVB12BQ9H7P6 319 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 IL1RL2Q9HB29 575 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 SPAG4Q9NPE6 437 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 ADA2Q9NZK5 511 aa24.72■■□□□ 1.55
CPNE1-205ENST00000401607 DYTNA2CJ06 578 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 PSMG1O95456 288 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 PRPS2P11908 318 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 SDC1P18827 310 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 XRCC1P18887 633 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-205ENST00000401607 PKLRP30613 574 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 MEF2AQ02078 507 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-205ENST00000401607 CLHC1Q8NHS4 586 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 REPS1Q96D71 796 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 DPY30Q9C005 99 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 TMEM181Q9P2C4 612 aa24.71■■□□□ 1.55
CPNE1-205ENST00000401607 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-205ENST00000401607 H0Y3Z8 333 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 RASGRP1O95267 797 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 LMNAP02545 664 aaKnown RBP24.7■■□□□ 1.55
CPNE1-205ENST00000401607 TACR1P25103 407 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 PSMB5P28074 263 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 ERFP50548 548 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 RAB28P51157 221 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 DGKQP52824 942 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 LAPTM5Q13571 262 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 CCNIQ14094 377 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 WASH2PQ6VEQ5 465 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 FAM129CQ86XR2 697 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 RAB42Q8N4Z0 105 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 MINDY1Q8N5J2 469 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 KRTCAP2Q8N6L1 136 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 OR52E1Q8NGJ3 308 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 LRRC58Q96CX6 371 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 CLMPQ9H6B4 373 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 XKR8Q9H6D3 395 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 DCLRE1BQ9H816 532 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 CAAP1Q9H8G2 361 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 WASH6PQ9NQA3 447 aa24.7■■□□□ 1.55
CPNE1-205ENST00000401607 TRIM38O00635 465 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 ME2P23368 584 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 MAPK1P28482 360 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 RPS13P62277 151 aaKnown RBP24.7■■□□□ 1.54
CPNE1-205ENST00000401607 KRT33BQ14525 404 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 NOXRED1Q6NXP6 359 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 SLC2A7Q6PXP3 512 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 C17orf64Q86WR6 236 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 ZNF740Q8NDX6 193 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 C11orf24Q96F05 449 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-205ENST00000401607 ZBTB18Q99592 522 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 HOPXQ9BPY8 73 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-205ENST00000401607 PCBD2Q9H0N5 130 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 TBC1D17Q9HA65 648 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms