RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TEX19Q8NA77 164 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 FKBP10Q96AY3 582 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 C10orf90Q96M02 699 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 OR2A5Q96R48 311 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 KRT12Q99456 494 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 SPSB2Q99619 263 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 ZFYVE21Q9BQ24 234 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 NUDT9Q9BW91 350 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 TRIM31Q9BZY9 425 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 SLC26A1Q9H2B4 701 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 CLMPQ9H6B4 373 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 TAS2R13Q9NYV9 303 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 ANKMY1Q9P2S6 941 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 RNF14Q9UBS8 474 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 PDE10AQ9Y233 779 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 HEATR5BQ9P2D3 2071 aa15.15■□□□□ 0.02
ATG4B-203ENST00000400772 TSPAN12O95859 305 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 EIF2S1P05198 315 aaKnown RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 PIM1P11309 404 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 RPL21P46778 160 aaKnown RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 PGDP52209 483 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 FRG1Q14331 258 aaKnown RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 NAA25Q14CX7 972 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 HIF1AQ16665 826 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 ANKMY2Q8IV38 441 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 GABPB2Q8TAK5 448 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 LRRC39Q96DD0 335 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 SNF8Q96H20 258 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 IP6K3Q96PC2 410 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 WDR54Q9H977 334 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 PPANQ9NQ55 473 aaKnown RBP15.14■□□□□ 0.01
ATG4B-203ENST00000400772 P4HTMQ9NXG6 502 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 CTSFQ9UBX1 484 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 SNX24Q9Y343 169 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 MAU2Q9Y6X3 613 aa15.14■□□□□ 0.01
ATG4B-203ENST00000400772 VSTM2BA6NLU5 285 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 E7ESA3 106 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 RRADP55042 308 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 ARL4CP56559 192 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 ABATP80404 500 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 FOXK1P85037 733 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 RELAQ04206 551 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 CBLBQ13191 982 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 FASTKD3Q14CZ7 662 aaKnown RBP15.13■□□□□ 0.01
ATG4B-203ENST00000400772 NADK2Q4G0N4 442 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 DCAF10Q5QP82 559 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 HECTD2Q5U5R9 776 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 MBOAT1Q6ZNC8 495 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 C17orf53Q8N3J3 647 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-203ENST00000400772 ARHGEF39Q8N4T4 335 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 CCDC138Q96M89 665 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 SMAD5Q99717 465 aaKnown RBP15.13■□□□□ 0.01
ATG4B-203ENST00000400772 OLFM1Q99784 485 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 ABCF3Q9NUQ8 709 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 CUEDC1Q9NWM3 386 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-203ENST00000400772 VWA7Q9Y334 891 aa15.13■□□□□ 0.01
ATG4B-203ENST00000400772 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATG4B-203ENST00000400772 H7BY64 318 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 SOCS6O14544 535 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 HAT1O14929 419 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 SLC16A5O15375 505 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 CCNDBP1O95273 360 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 C8GP07360 202 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 FDXRP22570 491 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 MMP11P24347 488 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 RGS4P49798 205 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 EMP3P54852 163 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 MLLT10P55197 1068 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 SNRPNP63162 240 aaKnown RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PDIA2Q13087 525 aaKnown RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 RAPSNQ13702 412 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PHKG1Q16816 387 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 ZXDCQ2QGD7 858 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 HKDC1Q2TB90 917 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 LRRC8EQ6NSJ5 796 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 SHISA6Q6ZSJ9 500 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PLD3Q8IV08 490 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 GPATCH11Q8N954 259 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 FBXO36Q8NEA4 188 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 LINGO1Q96FE5 620 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 FER1L6-AS2Q96M78 137 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PRAP1Q96NZ9 151 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 SOX17Q9H6I2 414 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PARVBQ9HBI1 364 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 ZNF304Q9HCX3 659 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 MOCS1Q9NZB8 636 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 RUVBL1Q9Y265 456 aaKnown RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 ZNF451Q9Y4E5 1061 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PCDHGB7Q9Y5F8 929 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 PSAT1Q9Y617 370 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 TENM4Q6N022 2769 aa15.12■□□□□ 0.01
ATG4B-203ENST00000400772 MDC1Q14676 2089 aaKnown RBP15.12■□□□□ 0.01
ATG4B-203ENST00000400772 AGPSO00116 658 aa15.11■□□□□ 0.01
ATG4B-203ENST00000400772 PEX12O00623 359 aa15.11■□□□□ 0.01
ATG4B-203ENST00000400772 P2RX6O15547 441 aa15.11■□□□□ 0.01
ATG4B-203ENST00000400772 EZRP15311 586 aaKnown RBP15.11■□□□□ 0.01
ATG4B-203ENST00000400772 TBPL1P62380 186 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms