RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CFAP36Q96G28 342 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 PWWP2AQ96N64 755 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 KRT12Q99456 494 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 TRIM4Q9C037 500 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 NXT1Q9UKK6 140 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 G3BP2Q9UN86 482 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 LOC105369274A0A096LPK9 316 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 LOC102723532A0A0G2JNH3 316 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 HYKKA2RU49 373 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 E7ESA3 106 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC16A5O15375 505 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PDGFAP04085 211 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 UMODP07911 640 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 EZRP15311 586 aaKnown RBP14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 CDKN2DP55273 166 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 KCNC4Q03721 635 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 TSTA3Q13630 321 aaPredicted RBP14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 MUM1Q2TAK8 710 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PRTGQ2VWP7 1150 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PRMT9Q6P2P2 845 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 FBXO42Q6P3S6 717 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 TRMT10BQ6PF06 316 aaKnown RBP14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PAQR3Q6TCH7 311 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 COX15Q7KZN9 410 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 HPS6Q86YV9 775 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PALM2Q8IXS6 379 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 OR4N4Q8N0Y3 316 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 MYO1HQ8N1T3 1032 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 BBOF1Q8ND07 529 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PPFIBP2Q8ND30 876 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 MCOLN3Q8TDD5 553 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 EEF1AKMT1Q8WVE0 214 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 FER1L6-AS2Q96M78 137 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 CCDC138Q96M89 665 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 SPSB2Q99619 263 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 CLMPQ9H6B4 373 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PPANQ9NQ55 473 aaKnown RBP14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PDE10AQ9Y233 779 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 ZNF451Q9Y4E5 1061 aa14.21□□□□□ -0.13
SMIM11A-203ENST00000399299 PYCARD-AS1I3L0S3 204 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 PEX12O00623 359 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 FDXRP22570 491 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 HRH2P25021 359 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 RPL21P46778 160 aaKnown RBP14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 NKG7Q16617 165 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 HP1BP3Q5SSJ5 553 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 FAM45BPQ6NSW5 357 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 FAM45AQ8TCE6 357 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 MVB12AQ96EY5 273 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 OR2A5Q96R48 311 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 PCBD2Q9H0N5 130 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 PARVBQ9HBI1 364 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 CCDC177Q9NQR7 707 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 STOX2Q9P2F5 926 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 SLC17A6Q9P2U8 582 aa14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMIM11A-203ENST00000399299 FAM187AA6NFU0 413 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 VSTM2BA6NLU5 285 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 H0YGG7 62 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 TXNDC9O14530 226 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 KLHL41O60662 606 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 TSPAN12O95859 305 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 EIF2S1P05198 315 aaKnown RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 MMP11P24347 488 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 SOX8P57073 446 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 IL2P60568 153 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 TBPL1P62380 186 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ETF1P62495 437 aaKnown RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 MGAT5Q09328 741 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 DCAF10Q5QP82 559 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 HECTD2Q5U5R9 776 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 GARNL3Q5VVW2 1013 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 MAATS1Q7Z4T9 603 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 PPP1R32Q7Z5V6 425 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ANKMY2Q8IV38 441 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 CLEC1AQ8NC01 280 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 SPATA4Q8NEY3 305 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 FDCSPQ8NFU4 85 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 LINGO1Q96FE5 620 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 C10orf90Q96M02 699 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 SMAD5Q99717 465 aaKnown RBP14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ERP44Q9BS26 406 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 NUDT9Q9BW91 350 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ZNF304Q9HCX3 659 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 P4HTMQ9NXG6 502 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 GPR83Q9NYM4 423 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 MOCS1Q9NZB8 636 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 WHRNQ9P202 907 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ZFATQ9P243 1243 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 ADAMTS6Q9UKP5 1117 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 VWA7Q9Y334 891 aa14.19□□□□□ -0.14
SMIM11A-203ENST00000399299 LRRK2Q5S007 2527 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms