RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 C1orf216Q8TAB5 229 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ATXN2LQ8WWM7 1075 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SENP8Q96LD8 212 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR52E6Q96RD3 313 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SH3BGRL3Q9H299 93 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SCP2D1Q9UJQ7 156 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZFR2Q9UPR6 939 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 LIPT1Q9Y234 373 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HS3ST4Q9Y661 456 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MYOFQ9NZM1 2061 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MAGEA13PA6NCF6 341 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ISM1B1AKI9 464 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TCP11X1B4DZS4 312 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PMM2O15305 246 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 INSIG1O15503 277 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC19A2O60779 497 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CLPTM1O96005 669 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DHFRP00374 187 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ADH4P08319 380 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 UBL4AP11441 157 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HOXD8P13378 290 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 IL7RP16871 459 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FBLP22087 321 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC6A9P48067 706 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CASP4P49662 377 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF81P51508 661 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HMGCS1Q01581 520 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CHI3L2Q15782 390 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C6orf141Q5SZD1 244 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TLDC1Q6P9B6 456 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ADCY4Q8NFM4 1077 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR4K17Q8NGC6 315 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LENG1Q96BZ8 264 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 MSI2Q96DH6 328 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 HIC2Q96JB3 615 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C8orf48Q96LL4 319 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ORAI3Q9BRQ5 295 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC6A16Q9GZN6 736 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC25A51Q9H1U9 297 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MID1IP1Q9NPA3 183 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CCM2LQ9NUG4 571 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 PARPBPQ9NWS1 579 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 POLLQ9UGP5 575 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FBXO2Q9UK22 296 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 POU2F3Q9UKI9 436 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC6A14Q9UN76 642 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ICKQ9UPZ9 632 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NSG1A0A0A6YYJ2 146 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C4orf47A7E2U8 309 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SNPHO15079 494 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PPM1BO75688 479 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GLCEO94923 617 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 APOL3O95236 402 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PGRP06401 933 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NR4A2P43354 598 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ACADVLP49748 655 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CREB5Q02930 508 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PTP4A2Q12974 167 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ECH1Q13011 328 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FNDC1Q4ZHG4 1894 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 KLHDC10Q6PID8 442 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OTOP1Q7RTM1 612 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF606Q8WXB4 792 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TANKQ92844 425 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DGAT2Q96PD7 388 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CD180Q99467 661 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NTPCRQ9BSD7 190 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 LACRTQ9GZZ8 138 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NUAK2Q9H093 628 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HDHD2Q9H0R4 259 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NIPAL2Q9H841 368 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 BRWD1Q9NSI6 2320 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SPATA6Q9NWH7 488 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 CLDND1Q9NY35 253 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NYNRINQ9P2P1 1898 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ADAM21Q9UKJ8 722 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NOVA2Q9UNW9 492 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 APC2O95996 2303 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TRIM49BA6NDI0 452 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 UGDHO60701 494 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TRBC1P01850 177 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MSL3P1P0C860 447 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FGFR4P22455 802 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 AMPD1P23109 780 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GNPDA1P46926 289 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ATP12AP54707 1039 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PRPS1P60891 318 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 YPEL5P62699 121 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GPLD1P80108 840 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LIPEQ05469 1076 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 POU6F1Q14863 301 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF630Q2M218 657 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SPIN3Q5JUX0 258 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CES3Q6UWW8 571 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HPS6Q86YV9 775 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SCUBE1Q8IWY4 988 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SPAG16Q8N0X2 631 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DHRSXQ8N5I4 330 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 UTP15Q8TED0 518 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 OXNAD1Q96HP4 312 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms