RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FZD4Q9ULV1 537 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 FAM32AQ9Y421 112 aaKnown RBP4.8□□□□□ -1.64
SMAD4-202ENST00000398417 CHD5Q8TDI0 1954 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 GRM6O15303 877 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 BCAS1O75363 584 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 VMACQ2NL98 169 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 USP39Q53GS9 565 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RBM48Q5RL73 367 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM220Q6QAJ8 160 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 DCAF4L2Q8NA75 395 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CHST14Q8NCH0 376 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TSPEARQ8WU66 669 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CMTM7Q96FZ5 175 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 HEPHQ9BQS7 1158 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 A0A0G2JN53 185 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 NPIPB15A6NHN6 443 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MAGEB17A8MXT2 336 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PGLSO95336 258 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CHRM5P08912 532 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 NUDT7P0C024 238 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 IMPDH2P12268 514 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PSMA3P25788 255 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ACRV1P26436 265 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 C2orf80Q0P641 193 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CYHR1Q6ZMK1 362 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CCDC149Q6ZUS6 474 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 HEATR4Q86WZ0 1026 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 POC5Q8NA72 575 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RBM4BQ9BQ04 359 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RBM4Q9BWF3 364 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 RBMX2Q9Y388 322 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 KPNA5O15131 536 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PRMT3O60678 531 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 EPOP01588 193 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 STATHP02808 62 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 GBAP04062 536 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CDKN2CP42773 168 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MRPL58Q14197 206 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PCBP2Q15366 365 aaKnown RBP eCLIP4.79□□□□□ -1.649e-7■■■■■ 37.6
SMAD4-202ENST00000398417 ATAD3BQ5T9A4 648 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 GPR153Q6NV75 609 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 Q6ZVL8 140 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CDK20Q8IZL9 346 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 BEND7Q8N7W2 519 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 HPS1Q92902 700 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ZHX1-C8orf76Q96EF9 292 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TCF25Q9BQ70 676 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 REXO4Q9GZR2 422 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF556Q9HAH1 456 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MAGEE1Q9HCI5 957 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SLCO3A1Q9UIG8 710 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF225Q9UK10 706 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PLAGL1Q9UM63 463 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MAP4K5Q9Y4K4 846 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 OARD1Q9Y530 152 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM247A6NEH6 219 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MPC1LP0DKB6 136 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TNFRSF1BP20333 461 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ARL3P36405 182 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TRPC1P48995 793 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MECP2P51608 486 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 LBX1P52954 281 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 GANABQ14697 944 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PLEKHG6Q3KR16 790 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TPRG1Q6ZUI0 275 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 P2RY8Q86VZ1 359 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CLSTN3Q9BQT9 956 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 OR51B5Q9H339 312 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 NTN4Q9HB63 628 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PDFQ9HBH1 243 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PTBP2Q9UKA9 531 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PPIEQ9UNP9 301 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 SAMD4AQ9UPU9 718 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TRAV19A0A0A6YYK7 116 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CLIC1O00299 241 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CD160O95971 181 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 IFNA16P05015 189 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 DDX5P17844 614 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 WASP42768 502 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ZFP36L2P47974 494 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 UBE3AQ05086 875 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 GPR33Q49SQ1 333 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 C22orf39Q6P5X5 142 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CLIP4Q8N3C7 705 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CHDHQ8NE62 594 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PPCDCQ96CD2 204 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 VPS35Q96QK1 796 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 MBOAT4Q96T53 435 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 TSEN34Q9BSV6 310 aaKnown RBP4.79□□□□□ -1.64
SMAD4-202ENST00000398417 CNPPD1Q9BV87 410 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 FUNDC2Q9BWH2 189 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 INSL5Q9Y5Q6 135 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 PGRP06401 933 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ZDHHC11BP0C7U3 371 aa4.79□□□□□ -1.64
SMAD4-202ENST00000398417 ATP1B2P14415 290 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms