RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ZNF460Q14592 562 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 NCF4Q15080 339 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 PPP1R3AQ16821 1122 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 PRTGQ2VWP7 1150 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 DEFB109BQ30KR1 87 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 TCTE1Q5JU00 501 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 C1orf189Q5VU69 101 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 FAM69BQ5VUD6 431 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 YOD1Q5VVQ6 348 aaPredicted RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 AGTRAPQ6RW13 159 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ARHGEF39Q8N4T4 335 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ANKRD49Q8WVL7 239 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 OR2A5Q96R48 311 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 RBBP8Q99708 897 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 CPNE1Q99829 537 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ZFYVE21Q9BQ24 234 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 SELENOSQ9BQE4 189 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 NDC1Q9BTX1 674 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 SGPP1Q9BX95 441 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ADNPQ9H2P0 1102 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 POPDC3Q9HBV1 291 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 STARD5Q9NSY2 213 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 CUEDC1Q9NWM3 386 aaPredicted RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 GEMIN8Q9NWZ8 242 aaKnown RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 NOVA2Q9UNW9 492 aaKnown RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 SH2B3Q9UQQ2 575 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 CDC14CA4D256 554 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 CCNDBP1O95273 360 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 AGXTP21549 392 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 ECHS1P30084 290 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 ARSFP54793 590 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 POLE2P56282 527 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 AP1S2P56377 157 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 VSX2P58304 361 aaPredicted RBP15.97■□□□□ 0.15
APTR-201ENST00000398043 DCDP81605 110 aaKnown RBP15.97■□□□□ 0.15
APTR-201ENST00000398043 POU4F1Q01851 419 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 GRM7Q14831 915 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 KBTBD12Q3ZCT8 623 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 NKAIN1Q4KMZ8 207 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 WASHC2DQ5SRD0 308 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 MRPL14Q6P1L8 145 aaKnown RBP15.97■□□□□ 0.15
APTR-201ENST00000398043 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 RELL1Q8IUW5 271 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 TMEM151BQ8IW70 566 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 OR56A3Q8NH54 315 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 APOBEC4Q8WW27 367 aaKnown RBP15.97■□□□□ 0.15
APTR-201ENST00000398043 GPR22Q99680 433 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 DHRS4Q9BTZ2 278 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 SLC7A5P2Q9GIP4 190 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 CCDC177Q9NQR7 707 aaPredicted RBP15.97■□□□□ 0.15
APTR-201ENST00000398043 CUTCQ9NTM9 273 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 TUBD1Q9UJT1 453 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 POLHQ9Y253 713 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 ZNF462Q96JM2 2506 aa15.97■□□□□ 0.15
APTR-201ENST00000398043 A0A1B0GX78 115 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 H0YGG7 62 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 DSCR3O14972 297 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 ENO2P09104 434 aaPredicted RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 EZRP15311 586 aaKnown RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 GP5P40197 560 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 CCR10P46092 362 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 ARF3P61204 181 aaPredicted RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 TSTA3Q13630 321 aaPredicted RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 UBAP2Q5T6F2 1119 aaKnown RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 PRAMEF13Q5VWM6 474 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 COX15Q7KZN9 410 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 DTWD1Q8N5C7 304 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 NKAPQ8N5F7 415 aaKnown RBP15.96■□□□□ 0.15
APTR-201ENST00000398043 MNS1Q8NEH6 495 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 KIF18AQ8NI77 898 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 FBF1Q8TES7 1133 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 CDKL2Q92772 493 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 FBXL8Q96CD0 374 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 ARHGAP9Q9BRR9 750 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 FAM129AQ9BZQ8 928 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 ATG10Q9H0Y0 220 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 CAB39LQ9H9S4 337 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 TMEM184CQ9NVA4 438 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 SNX7Q9UNH6 387 aa15.96■□□□□ 0.15
APTR-201ENST00000398043 CTAGE15A4D2H0 777 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 CDC7O00311 574 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 HAT1O14929 419 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 CTAGE8P0CG41 777 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 NPPBP16860 134 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 SAT1P21673 171 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 EMP3P54852 163 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 NAE1Q13564 534 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 ZKSCAN8Q15776 578 aaPredicted RBP15.95■□□□□ 0.14
APTR-201ENST00000398043 GLE1Q53GS7 698 aaKnown RBP15.95■□□□□ 0.14
APTR-201ENST00000398043 LCTLQ6UWM7 567 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 TTLL10Q6ZVT0 673 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 CTAGE6Q86UF2 777 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 APLFQ8IW19 511 aaPredicted RBP15.95■□□□□ 0.14
APTR-201ENST00000398043 CTAGE4Q8IX94 777 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 THAP4Q8WY91 577 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 C10orf90Q96M02 699 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 OR4K3Q96R72 315 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 PCBD2Q9H0N5 130 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 TXLNGQ9NUQ3 528 aa15.95■□□□□ 0.14
APTR-201ENST00000398043 IRAK4Q9NWZ3 460 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms