RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 WNT16Q9UBV4 365 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RBM8AQ9Y5S9 174 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CASP8AP2Q9UKL3 1982 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ADAMTS7Q9UKP4 1686 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RPAP1Q9BWH6 1393 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 MAST3O60307 1309 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SH3TC1Q8TE82 1336 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PPIP5K1Q6PFW1 1433 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 FAM90A10PA6NDY2 464 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZAR1LA6NP61 321 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 GABRR3A8MPY1 467 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CHUKO15111 745 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PJA2O43164 708 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TGM6O95932 706 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ANKRD34CP0C6C1 535 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SLC2A4P14672 509 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DPEP1P16444 411 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TYK2P29597 1187 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RAP1GAPP47736 663 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 MTHFSP49914 203 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ITGA1P56199 1179 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CLDN2P57739 230 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TUBA4AP68366 448 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CNTN2Q02246 1040 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZP2Q05996 745 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 E2F2Q14209 437 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RPE65Q16518 533 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DEFB115Q30KQ5 88 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 LRRC38Q5VT99 294 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 C8orf74Q6P047 294 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 QSOX2Q6ZRP7 698 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PAQR9Q6ZVX9 377 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 NEK8Q86SG6 692 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DSELQ8IZU8 1212 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 COMMD1Q8N668 190 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SCAIQ8N9R8 606 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 MYCBPAPQ8TBZ2 947 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 GDPD5Q8WTR4 605 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ASZ1Q8WWH4 475 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ULK4Q96C45 1275 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RBM41Q96IZ5 413 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DCAF5Q96JK2 942 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 LRR1Q96L50 414 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZSWIM3Q96MP5 696 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PANX1Q96RD7 426 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 BBS4Q96RK4 519 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ALG12Q9BV10 488 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 FICDQ9BVA6 458 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SAP30LQ9HAJ7 183 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PIGVQ9NUD9 493 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TAS2R14Q9NYV8 317 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 GTSE1Q9NYZ3 720 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ONECUT1Q9UBC0 465 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PEF1Q9UBV8 284 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 NKX1-2Q9UD57 310 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TUBGCP4Q9UGJ1 667 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 RNF150Q9ULK6 438 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 MRPS33Q9Y291 106 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZNF510Q9Y2H8 683 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 HCFC2Q9Y5Z7 792 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ITSN1Q15811 1721 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SMG6Q86US8 1419 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 CLDN4O14493 209 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 ZNF208O43345 1280 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 TRIM3O75382 744 aaPredicted RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 CLTAP09496 248 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 UMPSP11172 480 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 F3P13726 295 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 PAICSP22234 425 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 DLSTP36957 453 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 CLCN7P51798 805 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 PHEXP78562 749 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 HSD11B2P80365 405 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 OTUD4Q01804 1114 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 RASGEF1BQ0VAM2 473 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 TRAP1Q12931 704 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 HSPB3Q12988 150 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 DYNC1I2Q13409 638 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 EIF4HQ15056 248 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SHBQ15464 509 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SPANXN2Q5MJ10 180 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 RABGAP1LQ5R372 815 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 ATF7IP2Q5U623 682 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 TTC23LQ6PF05 361 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 LRRC31Q6UY01 552 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 B3GLCTQ6Y288 498 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 ASPGQ86U10 573 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SHISA5Q8N114 240 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 LKAAEAR1Q8TD35 194 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 PDCD6IPQ8WUM4 868 aaKnown RBP6.52□□□□□ -1.37
SMCO1-201ENST00000397537 FCGR1BQ92637 280 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SENP8Q96LD8 212 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 TAAR6Q96RI8 345 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 RDH8Q9NYR8 311 aa6.52□□□□□ -1.37
SMCO1-201ENST00000397537 SEMA5BQ9P283 1151 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms