RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SLBPQ14493 270 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PERM1Q5SV97 790 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ELMSAN1Q6PJG2 1045 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PLD3Q8IV08 490 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 RBM4BQ9BQ04 359 aaKnown RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 RBM4Q9BWF3 364 aaKnown RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM165Q9HC07 324 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 KRT84Q9NSB2 600 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 RAB23Q9ULC3 237 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 FZD4Q9ULV1 537 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PADI4Q9UM07 663 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PPT2Q9UMR5 302 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PIKFYVEQ9Y2I7 2098 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ERN1O75460 977 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 PTGER1P34995 402 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC14A1Q13336 389 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 HIST2H2ACQ16777 129 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 HIST2H2AA3Q6FI13 130 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 C8orf82Q6P1X6 216 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMCO5AQ8N6Q1 288 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF548Q8NEK5 533 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR8J3Q8NGG0 315 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 OTUB1Q96FW1 271 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 PDLIM5Q96HC4 596 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 SORBS1Q9BX66 1292 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 TPT1P8Q9HAU6 139 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 PRDM8Q9NQV8 689 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 SCN3BQ9NY72 215 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 IL36AQ9UHA7 158 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 LOC100130705A0A1B0GUX0 176 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 RTCAO00442 366 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 AP1G1O43747 822 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CDK4P11802 303 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 VIPR1P32241 457 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 MAP2K4P45985 399 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 NUDT6P53370 316 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 GALNT18Q6P9A2 607 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 Q6ZNB5 142 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 AHSA2Q719I0 299 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ASB11Q8WXH4 323 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 RORBQ92753 470 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ITFG2Q969R8 447 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 PYURFQ96I23 114 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 HSH2DQ96JZ2 352 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 BARD1Q99728 777 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 NRTNQ99748 197 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 NPLQ9BXD5 320 aaPredicted RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC12A9Q9BXP2 914 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CD320Q9NPF0 282 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 TBC1D23Q9NUY8 699 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 FAM118AQ9NWS6 357 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 C5AR2Q9P296 337 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 RHCGQ9UBD6 479 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ABCG2Q9UNQ0 655 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 C5orf42Q9H799 3197 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 H0Y858 1186 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 PCDH7O60245 1069 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 KLK1P06870 262 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CTSAP10619 480 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 IRS1P35568 1242 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZFP36L2P47974 494 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CLDN8P56748 225 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 CD47Q08722 323 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 GANABQ14697 944 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 RUNDC3AQ59EK9 446 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 LRRC70Q7Z2Q7 622 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 RD3Q7Z3Z2 195 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM179BQ7Z7N9 219 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRIM73Q86UV7 250 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 ERI1Q8IV48 349 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 MFSD2AQ8NA29 543 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 UBE2FQ969M7 185 aa10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 DNMT3BQ9UBC3 853 aaKnown RBP10.11□□□□□ -0.79
CPSF1P1-201ENST00000397477 C5orf58C9J3I9 102 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 DLGAP1O14490 977 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 WNT9AO14904 365 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF821O75541 412 aaPredicted RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 PCCBP05166 539 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 FABP3P05413 133 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 EPHX1P07099 455 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 DCTP40126 519 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 C21orf59P57076 290 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 LRRC26Q2I0M4 334 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 C11orf91Q3C1V1 193 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 Q6ZPB1 254 aaPredicted RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ADCK1Q86TW2 530 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 AADATQ8N5Z0 425 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 DPP10Q8N608 796 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 RASGEF1AQ8N9B8 481 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 PIK3C3Q8NEB9 887 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 HUS1BQ8NHY5 278 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 KCNC2Q96PR1 638 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms