RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CNTFP26441 200 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 TNFRSF8P28908 595 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 STAT5AP42229 794 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 HNMTP50135 292 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 CDKL1Q00532 357 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 LCTLQ6UWM7 567 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 PAQR7Q86WK9 346 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 TTC29Q8NA56 475 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 UBLCP1Q8WVY7 318 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 UBXN10Q96LJ8 280 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 PRAP1Q96NZ9 151 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 ZFYVE21Q9BQ24 234 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 VPS11Q9H270 941 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 ANKZF1Q9H8Y5 726 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 TMEM184CQ9NVA4 438 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 CROTQ9UKG9 612 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 LHX6Q9UPM6 363 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 A0A096LPK6 155 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 MEN1O00255 615 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 EFSO43281 561 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 C2P06681 752 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 ATXN8OSP0DMR3 200 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 MYBL2P10244 700 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 AGXTP21549 392 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 SLC26A3P40879 764 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 SLC29A2Q14542 456 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 PPP1R3AQ16821 1122 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 FAM83EQ2M2I3 478 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 FBXO42Q6P3S6 717 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 OR56A3Q8NH54 315 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 STAG3L4Q8TBR4 150 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 EXT2Q93063 718 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 RERGQ96A58 199 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 KIAA1191Q96A73 305 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 CRELD1Q96HD1 420 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 LRFN5Q96NI6 719 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 SGPP1Q9BX95 441 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 STARD5Q9NSY2 213 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 CUEDC1Q9NWM3 386 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 CD274Q9NZQ7 290 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 SRPK3Q9UPE1 567 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 SSUH2Q9Y2M2 353 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 DYRK1BQ9Y463 629 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 FREM2Q5SZK8 3169 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 DMXL2Q8TDJ6 3036 aa24.31■■□□□ 1.48
TSPAN4-207ENST00000397411 HMX2A2RU54 273 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 KRT37O76014 449 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 CTSBP07858 339 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 TFEBP19484 476 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 ALAS2P22557 587 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 GMPRP36959 345 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 ARSFP54793 590 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 GPS2Q13227 327 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 GRM7Q14831 915 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 TGFBIQ15582 683 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 WASHC2DQ5SRD0 308 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 FAM199XQ6PEV8 388 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 GPR155Q7Z3F1 870 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 TCAIMQ8N3R3 496 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 SLC38A9Q8NBW4 561 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 NXNL1Q96CM4 212 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 TXLNGYQ9BZA5 131 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 ALG9Q9H6U8 611 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 NDOR1Q9UHB4 597 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 ZNF180Q9UJW8 692 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 KCND3Q9UK17 655 aa24.3■■□□□ 1.48
TSPAN4-207ENST00000397411 SNRPAP09012 282 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 NPPBP16860 134 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 GRK3P35626 688 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 RPS15P62841 145 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 OR4D1Q15615 310 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 PTCHD3Q3KNS1 767 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 C1orf189Q5VU69 101 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 FRMPD2BQ6IN97 320 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 ZNF425Q6IV72 752 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 KLC3Q6P597 504 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 RNF44Q7L0R7 432 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 THOC6Q86W42 341 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 DSELQ8IZU8 1212 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 CT55Q8WUE5 264 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 DCAKDQ8WVC6 231 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 KCTD4Q8WVF5 259 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 PRORYQ9H606 182 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 WWOXQ9NZC7 414 aa24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 V9GYY5 206 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-207ENST00000397411 WDFY3Q8IZQ1 3526 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 LOC105369274A0A096LPK9 316 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 IGKV1-8A0A0C4DH67 115 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 LOC102723532A0A0G2JNH3 316 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 TRIM49D1C9J1S8 452 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 H0YGG7 62 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 K7ENP7 123 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 NRP2O60462 931 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 CDH1P12830 882 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 EZRP15311 586 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 ARF3P61204 181 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 DLG1Q12959 904 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 DNASE1L3Q13609 305 aa24.28■■□□□ 1.48
TSPAN4-207ENST00000397411 FAM214AQ32MH5 1076 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms