RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 EXT2Q93063 718 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 NXNL1Q96CM4 212 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 SPRTNQ9H040 489 aaPredicted RBP20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 SH2B3Q9UQQ2 575 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 PCDHB3Q9Y5E6 796 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 PTPRQQ9UMZ3 2332 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 LAMA5O15230 3695 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 DSPP15924 2871 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 A0A0J9YVX5 310 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 SNRPAP09012 282 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 HNMTP50135 292 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 SRSF6Q13247 344 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 MAP7Q14244 749 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 PTCHD3Q3KNS1 767 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 MANEAQ5SRI9 462 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 ADGRD1Q6QNK2 874 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 LCTLQ6UWM7 567 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 RNF44Q7L0R7 432 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 C17orf64Q86WR6 236 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 HNRNPLLQ8WVV9 542 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 SELENOSQ9BQE4 189 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 CCDC77Q9BR77 488 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 HAUS8Q9BT25 410 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 ACTR5Q9H9F9 607 aaPredicted RBP20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 FETUBQ9UGM5 382 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 SNX7Q9UNH6 387 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 ZFHX4Q86UP3 3567 aa20.32■□□□□ 0.84
TSPAN4-206ENST00000397408 H3BMH7 237 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 ZSCAN9O15535 394 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 ZNF749O43361 778 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 MT-ND3P03897 115 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 SHBGP04278 402 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 FAM83EQ2M2I3 478 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 LGSNQ5TDP6 509 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 ISCA2Q86U28 154 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 STAG3L4Q8TBR4 150 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 AENQ8WTP8 325 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 RHBDF1Q96CC6 855 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 CLIP3Q96DZ5 547 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 OR4K3Q96R72 315 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 ZFYVE21Q9BQ24 234 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 SLC7A5P2Q9GIP4 190 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 CD274Q9NZQ7 290 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 PSMC3IPQ9P2W1 217 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 CFAP47Q6ZTR5 3102 aa20.31■□□□□ 0.84
TSPAN4-206ENST00000397408 H7BY64 318 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 HAT1O14929 419 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 KERAO60938 352 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 KLHL2O95198 593 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 S100BP04271 92 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 CDH1P12830 882 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 HSD17B3P37058 310 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 STAT5AP42229 794 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 GLRBP48167 497 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 GPS2Q13227 327 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 C18orf21Q32NC0 220 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 FRMPD2BQ6IN97 320 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 EMBQ6PCB8 327 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 TCAIMQ8N3R3 496 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 ZNF655Q8N720 491 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 SLC38A9Q8NBW4 561 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 PRAP1Q96NZ9 151 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 CCNL2Q96S94 520 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 ATOH8Q96SQ7 321 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 PARD6BQ9BYG5 372 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 WWOXQ9NZC7 414 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 SSUH2Q9Y2M2 353 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 AP1M2Q9Y6Q5 423 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 CACNA1BQ00975 2339 aa20.3■□□□□ 0.84
TSPAN4-206ENST00000397408 SUPT3HB4E1H0 165 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 SUPT3HO75486 399 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 EZRP15311 586 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 NPPBP16860 134 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 HRH2P25021 359 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 KCNC1P48547 511 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 VSX2P58304 361 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 ABHD18Q0P651 414 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 COL9A2Q14055 689 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 CDKL4Q5MAI5 379 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 KLC3Q6P597 504 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 TLDC1Q6P9B6 456 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 C19orf48Q6RUI8 117 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 THOC6Q86W42 341 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 PDPRQ8NCN5 879 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 MTBPQ96DY7 904 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 TMEM79Q9BSE2 394 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 TMEM184CQ9NVA4 438 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 NUDT4Q9NZJ9 180 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 SEC16AO15027 2179 aa20.29■□□□□ 0.84
TSPAN4-206ENST00000397408 LOC105369274A0A096LPK9 316 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 LOC102723532A0A0G2JNH3 316 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 IQANK1A0A1B0GTG1 560 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 LOC101059948A0A1B0GTJ6 334 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 WDR47O94967 919 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 CCNYL3P0C7X3 344 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 LIFP15018 202 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 SLC6A12P48065 614 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 UCNP55089 124 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 ACAP2Q15057 778 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 FBXO48Q5FWF7 155 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms