RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 GPR65Q8IYL9 337 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 MRPL43Q8N983 215 aaKnown RBP23.04■■□□□ 1.28
PABPN1-202ENST00000397276 CMTM7Q96FZ5 175 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 MRGPRX3Q96LB0 322 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 SAGE1Q9NXZ1 904 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 LTBP2Q14767 1821 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 TRBV5-3A0A0A0MS03 114 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 ARHGEF33A8MVX0 844 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 E7EQ34 232 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 EIF3FO00303 357 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-202ENST00000397276 RFXANKO14593 260 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 ALPLP05186 524 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 PRPS2P11908 318 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 EPCAMP16422 314 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF30P17039 623 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 SYN1P17600 705 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 AMD1P17707 334 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 SHMT2P34897 504 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 TMEM132CQ8N3T6 1108 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 LMNTD1Q8N9Z9 388 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 CHPT1Q8WUD6 406 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 KCNH6Q9H252 994 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 C8orf4Q9NR00 106 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 DGKBQ9Y6T7 804 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 NUP214P35658 2090 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-202ENST00000397276 EFCAB14O75071 495 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 BDKRB1P46663 353 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 METAP1P53582 386 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 PIGFQ07326 219 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 ACOX1Q15067 660 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 SPESP1Q6UW49 350 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 RASGEF1AQ8N9B8 481 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 OR13F1Q8NGS4 319 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 POF1BQ8WVV4 589 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 ITCHQ96J02 903 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 RMND5AQ9H871 391 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 IL36AQ9UHA7 158 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 TRIM64BA6NI03 449 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 C16orf96A6NNT2 1141 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 WASH3PC4AMC7 463 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 ERN1O75460 977 aaKnown RBP23.03■■□□□ 1.28
PABPN1-202ENST00000397276 CTNNB1P35222 781 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 TSTA3Q13630 321 aaPredicted RBP23.03■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF284Q2VY69 593 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 GGTA1PQ4G0N0 100 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 THOC6Q86W42 341 aaKnown RBP23.03■■□□□ 1.28
PABPN1-202ENST00000397276 SYT12Q8IV01 421 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 CPPED1Q9BRF8 314 aaPredicted RBP23.03■■□□□ 1.28
PABPN1-202ENST00000397276 LHPPQ9H008 270 aa23.03■■□□□ 1.28
PABPN1-202ENST00000397276 SOBPA7XYQ1 873 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 THRBP10828 461 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 CDH3P22223 829 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 PDHA2P29803 388 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 VAC14Q08AM6 782 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 HENMT1Q5T8I9 393 aaKnown RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 GALNT10Q86SR1 603 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 IGFN1Q86VF2 1251 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF513Q8N8E2 541 aaPredicted RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 PNPT1Q8TCS8 783 aaKnown RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 TMEM159Q96B96 161 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 SDCCAG3Q96C92 435 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 ABHD8Q96I13 439 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 C11orf49Q9H6J7 331 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 KIAA1671Q9BY89 1806 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 KPNA3O00505 521 aaPredicted RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 JUPP14923 745 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 HLCSP50747 726 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 AP1S2P56377 157 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 SPIDRQ14159 915 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF77Q15935 545 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF551Q7Z340 670 aaPredicted RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 PIWIL3Q7Z3Z3 882 aaKnown RBP23.02■■□□□ 1.28
PABPN1-202ENST00000397276 ING2Q9H160 280 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 TOR3AQ9H497 397 aa23.02■■□□□ 1.28
PABPN1-202ENST00000397276 A0A096LPI6 279 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 CARNS1A5YM72 827 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 TTC36A6NLP5 189 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 PER2O15055 1255 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 PRSS23O95084 383 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 SCELO95171 688 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 BCL10O95999 233 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 FTH1P02794 183 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 IRS1P35568 1242 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 USP51Q70EK9 711 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 REXO4Q9GZR2 422 aaKnown RBP23.01■■□□□ 1.27
PABPN1-202ENST00000397276 DCAF13Q9NV06 445 aaKnown RBP23.01■■□□□ 1.27
PABPN1-202ENST00000397276 DNAJB9Q9UBS3 223 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 KPNA5O15131 536 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 E2F6O75461 281 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 ELFN1P0C7U0 828 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 TTKP33981 857 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 MESP2Q0VG99 397 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 SP140Q13342 867 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 DOC2AQ14183 400 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 TCEAL5Q5H9L2 206 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 ATG9BQ674R7 924 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 XAF1Q6GPH4 301 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 CES5AQ6NT32 575 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 TMEM179BQ7Z7N9 219 aa23.01■■□□□ 1.27
PABPN1-202ENST00000397276 BTN2A2Q8WVV5 523 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms