RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 IGLV3-12A0A075B6K2 115 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 A0A1W2PQ72 361 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 OR51F1A6NGY5 319 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 KPNA5O15131 536 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CTSVO60911 334 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ALOX12BO75342 701 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 BMP10O95393 424 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 FAM157BP0CG42 384 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CXCR2P25025 360 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ADRA1DP25100 572 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 AOAHP28039 575 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 STIP1P31948 543 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 TNFSF10P50591 281 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CSE1LP55060 971 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 VSX2P58304 361 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ARG2P78540 354 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ACVR1Q04771 509 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 KLC1Q07866 573 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CDH17Q12864 832 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CCDC38Q502W7 563 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 FASTKD1Q53R41 847 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 TSTD2Q5T7W7 516 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 MTFR2Q6P444 385 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 C1orf229Q6ZS94 237 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 NLRP9Q7RTR0 991 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 VRK3Q8IV63 474 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 RAB42Q8N4Z0 105 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 TC2NQ8N9U0 490 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 DNAAF3Q8N9W5 541 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 OR13J1Q8NGT2 312 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 OR4L1Q8NH43 312 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 NR4A3Q92570 626 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 IL17FQ96PD4 163 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ZNF160Q9HCG1 818 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 CHST11Q9NPF2 352 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 PIH1D1Q9NWS0 290 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ZC3H7BQ9UGR2 993 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 C3orf18Q9UK00 162 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 MRPS2Q9Y399 296 aaKnown RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 EPN1Q9Y6I3 576 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-208ENST00000397204 MAU2Q9Y6X3 613 aa8.35□□□□□ -1.07
CAPN3-208ENST00000397204 ZFHX3Q15911 3703 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 NSG1A0A0A6YYJ2 146 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 BTNL10A8MVZ5 291 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 MAP2K7O14733 419 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 OIP5O43482 229 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 SUN1O94901 812 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 GOT2P00505 430 aaKnown RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 CRYABP02511 175 aaKnown RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 SERPINA7P05543 415 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PTMAP06454 111 aaKnown RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PRR35P0CG20 571 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 ICAM2P13598 275 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PTMSP20962 102 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PTGER4P35408 488 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 CCNFP41002 786 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TTPAP49638 278 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TDGF1P3P51864 188 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 EMP2P54851 167 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 NAP1L1P55209 391 aaKnown RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 RIPPLY3P57055 190 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 AP2B1P63010 937 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 NAA25Q14CX7 972 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TMED2Q15363 201 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 ZXDCQ2QGD7 858 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 AARS2Q5JTZ9 985 aaKnown RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 AADACL2Q6P093 401 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 FBXO42Q6P3S6 717 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 XKRXQ6PP77 449 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 AFTPHQ6ULP2 937 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TMEM207Q6UWW9 146 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 GFRALQ6UXV0 394 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 OR52K1Q8NGK4 314 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 OR2A1Q8NGT9 310 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 SLC35B2Q8TB61 432 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 MAGEC3Q8TD91 643 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 ALG3Q92685 438 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PEX13Q92968 403 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 MVB12AQ96EY5 273 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 MAGEB10Q96LZ2 347 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TAAR6Q96RI8 345 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 RNF32Q9H0A6 362 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 IGSF5Q9NSI5 407 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 PTGFRNQ9P2B2 879 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 ANAPC5Q9UJX4 755 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TTC7AQ9ULT0 858 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 TFR2Q9UP52 801 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-208ENST00000397204 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms