RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 ST14Q9Y5Y6 855 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 KRT87PA6NCN2 255 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 K7EPI3 171 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 E2F3O00716 465 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 SLC16A8O95907 504 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 TSPAN8P19075 237 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ARL1P40616 181 aaPredicted RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 GDF5P43026 501 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 RPL14P50914 215 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 SF3A3Q12874 501 aaKnown RBP eCLIP12.8□□□□□ -0.368e-7■■□□□ 14.1
SEC13-209ENST00000397117 PRKG2Q13237 762 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 CLN3Q13286 438 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 GTF2H2Q13888 395 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 NR0B2Q15466 257 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 RPE65Q16518 533 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 DEFB133Q30KQ1 61 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 GTF2H2CQ6P1K8 395 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 AGTRAPQ6RW13 159 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ABRAXAS1Q6UWZ7 409 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 CCDC81Q6ZN84 652 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 LRRC70Q7Z2Q7 622 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 SYTL1Q8IYJ3 562 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 RAB42Q8N4Z0 105 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 TEX9Q8N6V9 391 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ZNF781Q8N8C0 355 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 AGR3Q8TD06 166 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 LMX1AQ8TE12 382 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ATP6V1E2Q96A05 226 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 THOC1Q96FV9 657 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 NSUN5Q96P11 429 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 ATG10Q9H0Y0 220 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 MVB12BQ9H7P6 319 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 PNPOQ9NVS9 261 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 POLG2Q9UHN1 485 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 LNPEPQ9UIQ6 1025 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 STK38LQ9Y2H1 464 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ASB1Q9Y576 335 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 COLEC10Q9Y6Z7 277 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 UNC13CQ8NB66 2214 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ANKRD12Q6UB98 2062 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 OR52A4PA6NMU1 304 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 CASC3O15234 703 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 EFSO43281 561 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 SLC28A2O43868 658 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 KDM1AO60341 852 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 KATNA1O75449 491 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 CRCPO75575 148 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 WDR47O94967 919 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 MTHFD1P11586 935 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 F3P13726 295 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 EPB42P16452 691 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 MPSTP25325 297 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 NDUFS1P28331 727 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 HSD17B2P37059 387 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 ELOCQ15369 112 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 SH2D4BQ5SQS7 431 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 DUS1LQ6P1R4 473 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 GOLGA7Q7Z5G4 137 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 NRROSQ86YC3 692 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 SNX31Q8N9S9 440 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 WDR36Q8NI36 951 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 NOL11Q9H8H0 719 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 MID1IP1Q9NPA3 183 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 TAAR2Q9P1P5 351 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
SEC13-209ENST00000397117 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
SEC13-209ENST00000397117 SNX3O60493 162 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 TNFSF15O95150 251 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 OTCP00480 354 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 SLC2A4P14672 509 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 IMPA1P29218 277 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 SLC6A12P48065 614 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 CCNG1P51959 295 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 HK2P52789 917 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 PDX1P52945 283 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 C1orf61Q13536 156 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 NAE1Q13564 534 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 TSTA3Q13630 321 aaPredicted RBP12.79□□□□□ -0.36
SEC13-209ENST00000397117 CGB2Q6NT52 195 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 ATG14Q6ZNE5 492 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 PIGWQ7Z7B1 504 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 GKN2Q86XP6 184 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 TRIM48Q8IWZ4 208 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 SLC35F3Q8IY50 421 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 ARL14Q8N4G2 192 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 EXD3Q8N9H8 876 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 ZNF480Q8WV37 535 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 CXorf40BQ96DE9 158 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 FAR2Q96K12 515 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 SIKE1Q9BRV8 207 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 LRRC61Q9BV99 259 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms