RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GABBR2O75899 941 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 EEFSECP57772 596 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 DSC3Q14574 896 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 AQP11Q8NBQ7 271 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 UCK2Q9BZX2 261 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 J3QLW9 94 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RPP14O95059 124 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 EPHX1P07099 455 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF19P17023 458 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 HSD17B2P37059 387 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 KCT2Q8NC54 265 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 FCAMRQ8WWV6 532 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 HCKP08631 526 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 FUT4P22083 530 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 NDUFV1P49821 464 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 MLLT6P55198 1093 aaPredicted RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 IL10RBQ08334 325 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ECM1Q16610 540 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 OSTF1Q92882 214 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RAB11FIP5Q9BXF6 653 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 AMBNQ9NP70 447 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF226Q9NYT6 803 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 EDARQ9UNE0 448 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RCBTB2O95199 551 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 NFATC1O95644 943 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 UGCGQ16739 394 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 GARNL3Q5VVW2 1013 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 LHFPL3Q86UP9 236 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 NRSN1Q8IZ57 195 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TMBIM1Q969X1 311 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RGMAQ96B86 450 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM80Q96HE8 168 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ARHGEF4Q9NR80 690 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TLL1O43897 1013 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 ANXA3P12429 323 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 L1CAMP32004 1257 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.23
COL4A3-202ENST00000396578 BTBD16Q32M84 506 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 SLC22A17Q8WUG5 538 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 PLD4Q96BZ4 506 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 SLC5A7Q9GZV3 580 aa13.65□□□□□ -0.23
COL4A3-202ENST00000396578 SMIM35A0A1B0GVV1 85 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ENGP17813 658 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF81P51508 661 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 IRF9Q00978 393 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 CEP68Q76N32 757 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SLC25A36Q96CQ1 311 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SLC7A4O43246 635 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 PLGP00747 810 aaPredicted RBP13.64□□□□□ -0.23
COL4A3-202ENST00000396578 GJB1P08034 283 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 CD47Q08722 323 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 MOGQ16653 247 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
COL4A3-202ENST00000396578 PDSS2Q86YH6 399 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SCGB1C1Q8TD33 95 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TM9SF2Q99805 663 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 HSD17B14Q9BPX1 270 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 EBF2Q9HAK2 575 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TEX13DA0A0J9YY54 714 aaPredicted RBP13.64□□□□□ -0.23
COL4A3-202ENST00000396578 E7EQ34 232 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 CD48P09326 243 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 BMP8BP34820 402 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TAS2R43P59537 309 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 HERV-K104P61576 105 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TLE2Q04725 743 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TUSC3Q13454 348 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ZNF404Q494X3 552 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 BMP8AQ7Z5Y6 402 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 PYURFQ96I23 114 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 FZD10Q9ULW2 581 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 TRAV6A0A075B6T7 132 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 CAPN14A8MX76 684 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 E2F3O00716 465 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 PBX1P40424 430 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 GPR68Q15743 365 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 MBOAT1Q6ZNC8 495 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 GALNT11Q8NCW6 608 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 MFSD8Q8NHS3 518 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ZIM2Q9NZV7 527 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 FBXL3Q9UKT7 428 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 SH2B3Q9UQQ2 575 aa13.64□□□□□ -0.23
COL4A3-202ENST00000396578 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms