RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 STX16O14662 325 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 SUPT7LO94864 414 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 EPHA3P29320 983 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 CPOXP36551 454 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 GNPDA1P46926 289 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 RGS4P49798 205 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 MNAT1P51948 309 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 NAA20P61599 178 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 C16orf72Q14CZ0 275 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 TSNQ15631 228 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 PDCD2Q16342 344 aaPredicted RBP16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 RPS27LQ71UM5 84 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 ARHGAP24Q8N264 748 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 FBXO27Q8NI29 283 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 ZDHHC1Q8WTX9 485 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 SCAMP4Q969E2 229 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 GLYATL1Q969I3 302 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 CMTM5Q96DZ9 223 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 ZCCHC2Q9C0B9 1178 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 SLC17A4Q9Y2C5 497 aa16.94■□□□□ 0.3
TNFSF13-205ENST00000396545 BSNQ9UPA5 3926 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 NPEPPSL1A6NEC2 478 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 ITGB2P05107 769 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 CBSLP0DN79 551 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 MSH3P20585 1137 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 AK4P27144 223 aaPredicted RBP16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 CBSP35520 551 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 RAP1GDS1P52306 607 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 OR1D5P58170 312 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 BTKQ06187 659 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 CLPPQ16740 277 aaPredicted RBP16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 LINC00303Q3SY05 128 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 AMZ1Q400G9 498 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 USP53Q70EK8 1073 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 ZFAND4Q86XD8 727 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 DTX1Q86Y01 620 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 PHYKPLQ8IUZ5 450 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 CPNE9Q8IYJ1 553 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 EXD3Q8N9H8 876 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 ACTRT2Q8TDY3 377 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 EEF1AKMT1Q8WVE0 214 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 USP7Q93009 1102 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 EXT2Q93063 718 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 MCUR1Q96AQ8 359 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 LINGO1Q96FE5 620 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 B3GNT4Q9C0J1 378 aa16.93■□□□□ 0.3
TNFSF13-205ENST00000396545 MAST4O15021 2626 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 RHPN2P1A8MT19 583 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 SUPT3HB4E1H0 165 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 BTN3A1O00481 513 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 SUPT3HO75486 399 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 FGF4P08620 206 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 RPS17P08708 135 aaKnown RBP16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 CD82P27701 267 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 AKT1P31749 480 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 MAPK10P53779 464 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 RAET1GQ6H3X3 334 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 SLC30A9Q6PML9 568 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 ZNF574Q6ZN55 896 aaPredicted RBP16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 NUDT22Q9BRQ3 303 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 TMPRSS11EQ9UL52 423 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 TRAF6Q9Y4K3 522 aa16.92■□□□□ 0.3
TNFSF13-205ENST00000396545 UBR5O95071 2799 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 HECTD1Q9ULT8 2610 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 IQCF5A8MTL0 148 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 FADS2P1A8MWK0 482 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 CDK14O94921 469 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 SLC25A14O95258 325 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 SIX3O95343 332 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 SOD1P00441 154 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 FTH1P02794 183 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 GSTM1P09488 218 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 ENO3P13929 434 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 GFAPP14136 432 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 CD1CP29017 333 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 ALDH4A1P30038 563 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 GPR3P46089 330 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 CTBSQ01459 385 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 GSTM4Q03013 218 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 UGT3A2Q3SY77 523 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 MANEAQ5SRI9 462 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 CHSY3Q70JA7 882 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 VASH2Q86V25 355 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 NAGSQ8N159 534 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 ZBTB2Q8N680 514 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 CEP70Q8NHQ1 597 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 PATE1Q8WXA2 126 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 SCARF2Q96GP6 870 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 ZNF514Q96K75 400 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 DENND2DQ9H6A0 471 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 PCDHGA4Q9Y5G9 962 aa16.91■□□□□ 0.3
TNFSF13-205ENST00000396545 IGHV5-10-1A0A0J9YXX1 117 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 LRRC14BA6NHZ5 514 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 CHUKO15111 745 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 COX4I1P13073 169 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 CCL4P13236 92 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms