RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 C10orf62Q5T681 223 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-202ENST00000396172 LIPJQ5W064 366 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 SPESP1Q6UW49 350 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 GPRIN3Q6ZVF9 776 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 EFL1Q7Z2Z2 1120 aaKnown RBP9.53□□□□□ -0.88
DDX39B-202ENST00000396172 SPRED1Q7Z699 444 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 PLXDC1Q8IUK5 500 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 LMNTD1Q8N9Z9 388 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 TRPC4APQ8TEL6 797 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 SLC5A11Q8WWX8 675 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 UBE2E3Q969T4 207 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 REPS1Q96D71 796 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 PTCD3Q96EY7 689 aaKnown RBP9.53□□□□□ -0.88
DDX39B-202ENST00000396172 C7orf26Q96N11 449 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 PITPNM3Q9BZ71 974 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 ACTR8Q9H981 624 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 MRPS30Q9NP92 439 aaKnown RBP9.53□□□□□ -0.88
DDX39B-202ENST00000396172 SEMA4BQ9NPR2 832 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-202ENST00000396172 PFDN4Q9NQP4 134 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 TRPS1Q9UHF7 1281 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 POMT2Q9UKY4 750 aa9.53□□□□□ -0.88
DDX39B-202ENST00000396172 ZNF292O60281 2723 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 IGHV1OR21-1A0A087WYE8 117 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 A0A0J9YY10 115 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 A0A1W2PPV9 198 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CPED1A4D0V7 1026 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 BTN3A3O00478 584 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 MAP3K7O43318 606 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 PRICKLE3O43900 615 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 UBOX5O94941 541 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CLDN9O95484 217 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ESRRBO95718 433 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CHEK2O96017 543 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 VIMP08670 466 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CD59P13987 128 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 POLR2CP19387 275 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ALDH4A1P30038 563 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 GRK3P35626 688 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 NCALDP61601 193 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 KCNJ2P63252 427 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 IRF8Q02556 426 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 PRDX1Q06830 199 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ILKQ13418 452 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 SF1Q15637 639 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 TBCCQ15814 346 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 C18orf21Q32NC0 220 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 FBXO48Q5FWF7 155 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ATG9BQ674R7 924 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 GUSBP11Q6P575 273 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 WDR74Q6RFH5 385 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 TMPRSS11BQ86T26 416 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CUZD1Q86UP6 607 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ZNF761Q86XN6 746 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CRLF3Q8IUI8 442 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 KRT78Q8N1N4 520 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 OR2L3Q8NG85 312 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 IFI44Q8TCB0 444 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 AGAP11Q8TF27 550 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 JPH3Q8WXH2 748 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ESAMQ96AP7 390 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 FAR2Q96K12 515 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CCDC3Q9BQI4 270 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 SLC29A3Q9BZD2 475 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ILKAPQ9H0C8 392 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 NOL11Q9H8H0 719 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 MID1IP1Q9NPA3 183 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 BAIAP2L1Q9UHR4 511 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 RAP2CQ9Y3L5 183 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ASB1Q9Y576 335 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 U3KQA8 63 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 MN1Q10571 1320 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 RIF1Q5UIP0 2472 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 COL27A1Q8IZC6 1860 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 TLCD2A6NGC4 264 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 LRRC14BA6NHZ5 514 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 C4orf47A7E2U8 309 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 SLCO1B7G3V0H7 640 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 UGT2B7P16662 529 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 NPPBP16860 134 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 TYRP1P17643 537 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 TGM1P22735 817 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 GSTM2P28161 218 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CASP2P42575 452 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CCR8P51685 355 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 CLNS1AP54105 237 aaKnown RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 PHEXP78562 749 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 OCRLQ01968 901 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ZNF33BQ06732 778 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 SQSTM1Q13501 440 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 HIST2H2ACQ16777 129 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 GALNTL6Q49A17 601 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 XKR6Q5GH73 641 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 ARL13AQ5H913 290 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-202ENST00000396172 STPG1Q5TH74 334 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 HIST2H2AA3Q6FI13 130 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 GRHL2Q6ISB3 625 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 MILR1Q7Z6M3 343 aa9.52□□□□□ -0.89
DDX39B-202ENST00000396172 OR2A1Q8NGT9 310 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms